Job Description P31825 Confidence 89.63% Date Wed Jan 25 15:20:49 GMT 2012 Rank 361 Aligned Residues 154 % Identity 16% Template c3pt6B_ PDB info PDB header:transferase/dna Chain: B: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: crystal structure of mouse dnmt1(650-1602) in complex with dna Resolution 3.00 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.															.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	A	G	V	K	R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	D	S	V	M	I	D	A	V	E	L	E	S	E	A	A	A	Q	A	Q	E	N	I	N	Q	S	P	W	A	E	R	I	N	V	H	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	Q
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																										.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																										.	.	.	.	.
Template Sequence		K	K	L	P	K	L	R	T	L	D	V	F	S	G	C	G	G	L	S	E	G	F	.	H	Q	A	G	I	S	E	T	L	W	A	I	E	M	W	D	P	A	A	Q	A	F	R	L	N	.	.	.	.	.	N	P	G	T	T	V	F	T	E	D	C	N	V	L	L	K	L	V	M	A	G	E	V	T	N	S	L
Template Known Secondary structure													T		T	T								.				T										S	S											.	.	.	.	.		T	T	S					S											T	T		S	B		T	T
Template Predicted Secondary structure																								.																										.	.	.	.	.
Template SS confidence
		1112	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.		.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.						.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.										.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.
Query Sequence		Q	W	I	T	Q	Q	T	V	R	F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	P	S	L	L	T	C	A	A	E	C	I	T	E	E	G	F	F	C	V	V	L	P	E	.	.	.	.	.	.	.	.	.	Q	I	G	N	G	F
Query Conservation																																																																			.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																																				.	.								.	.	.	.	.	.	.	.	.
Template Conservation																					.	.																																				.	.
Template Sequence		G	Q	R	L	P	Q	K	G	D	V	E	M	L	C	G	G	P	P	C	.	.	Q	G	F	S	G	M	N	R	F	N	S	R	T	Y	S	K	F	K	N	S	L	V	V	S	F	L	S	Y	C	D	Y	Y	R	P	R	.	.	F	F	L	L	E	N	V	R	N	F	V	S	Y	R	R	S	M	V	L	K	L	T
Template Known Secondary structure				B				T	T	T		S									.	.	T	T	S			S	S												T	S															S	.	.								S	G	G	G	T
Template Predicted Secondary structure																					.	.																																				.	.
Template SS confidence
		1211	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.			1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.			.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	L	A	L	S	M	G	W	H	L	R	L	R	T	D	V	A	E	N	E	A	R	L	P	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	C	L	V	R	M	G	Y	Q	C	T	F	G	V	L	Q	A	G	Q	Y	G	V	A	Q	T	R
Template Known Secondary structure								T	T										G	G	G	G	T		S	B
Template Predicted Secondary structure
Template SS confidence
		1287	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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