Job Description P31825 Confidence 94.01% Date Wed Jan 25 15:20:49 GMT 2012 Rank 344 Aligned Residues 129 % Identity 20% Template c3ps9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of mnmc from e. coli Resolution 2.54 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.												.	.	70	.	.	.	.	.	.	.	.															.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query Sequence		R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	.	.	.	.	.	.	.	.	.	.	.	D	S	V	M	I	D	A	V	E	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	A	A	Q	A	Q	E	N	I	N	Q	S	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	A	E	S	G	F	G	T	G	L	N	F	L	T	L	W	Q	A	F	D	Q	F	R	E	A	H	P	Q	A	Q	L	Q	R	L	H	F	I	S	F	E	K	F	P	L	T	R	A	D	L	A	L	A	H	Q	H	W	P	E	L	A	P	W	A	E	Q	L	Q	A	Q	W	P	M	P	L	P	G	C	H	R
Template Known Secondary structure									T	T	S																		T	T	S	S											S	S												T	T		G	G	G																S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
						93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure		.	.	.	.																								.	.	.	.
Query SS confidence		.	.	.	.																								.	.	.	.
Query Sequence		.	.	.	.	P	W	A	E	R	I	N	V	H	T	A	D	I	Q	Q	W	I	T	Q	Q	T	V	R	.	.	.	.	F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	P	S	L	L	T	C	A	A	E	C	I	T	E	E	G	F
Query Conservation		.	.	.	.																								.	.	.	.
Alig confidence		.	.	.	.																								.	.	.	.							.	.	.	.	.	.	.	.	.														.	.	.	.	.																.
Template Conservation																																							.	.	.	.	.	.	.	.	.														.	.	.	.	.																.
Template Sequence		L	L	L	D	A	G	R	V	T	L	D	L	W	F	G	D	I	N	E	L	T	S	Q	L	D	D	S	L	N	Q	K	V	D	A	W	F	L	.	.	.	.	.	.	.	.	.	D	G	F	A	P	A	K	N	P	D	M	W	T	.	.	.	.	.	Q	N	L	F	N	A	M	A	R	L	A	R	P	G	G	.
Template Known Secondary structure					G	G	G	T								S						G	G	G	B		G	G	G	T	T								.	.	.	.	.	.	.	.	.			S		G	G	G		G	G	G	S		.	.	.	.	.																.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.														.	.	.	.	.																.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.										.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	V	V	L	P	E	Q	I	G	N	G	F	T	E	L	A	L	S	M	G	W	H	L	R	L	R	T
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	T	L	A	T	F	T	S	A	G	F	V	R	R	G	L	Q	D	A	G	F	T	M	Q	K	R	K
Template Known Secondary structure		.	.					S														T
Template Predicted Secondary structure		.	.
Template SS confidence
				206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions