Job Description P31825 Confidence 99.71% Date Wed Jan 25 15:20:49 GMT 2012 Rank 121 Aligned Residues 148 % Identity 16% Template c3mq2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methyltransferase; PDBTitle: crystal structure of 16s rrna methyltranferase kamb Resolution 1.69 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		G	T	D	G	I	L	L	G	A	W	A	P	V	A	G	V	K	R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	D	S	V	M	I	D	A	V	E	L	E	S	E	A	A	A	Q	A	Q	E	N	I	N	Q	S	P	W	A	E	R	.	.	.	I	N	V	H	T	A	D	I	Q
Query Conservation																																																																						.	.	.
Alig confidence														.	.																								.																															.	.	.
Template Conservation														.	.																								.
Template Sequence		F	S	D	A	E	F	E	Q	L	R	S	Q	.	.	Y	D	D	V	V	L	D	V	G	T	G	D	G	K	H	P	Y	K	V	A	R	Q	N	.	P	S	R	L	V	V	A	L	D	A	D	K	S	R	M	E	K	I	S	A	K	A	A	A	K	P	A	K	G	G	L	P	N	L	L	Y	L	W	A	T	A	E
Template Known Secondary structure												T	T	.	.	S	S							S		T	T												.	T	T								S		G	G	G	G								T	S		G	G	G	T			T	T								S	T
Template Predicted Secondary structure														.	.																								.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	W	I	T	Q	Q	T	V	R	F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	P	S	L	L	T	C	A	A	E	C	I	T	E	E	G	F	F	C	V	V	L	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.															.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	P	.	.	P	L	S	G	V	G	E	L	H	V	L	M	P	W	.	.	.	.	.	.	.	.	.	.	.	.	G	S	L	L	R	G	V	L	G	S	S	P	E	M	L	R	G	M	A	A	V	C	R	P	G	A	S	F	L	V	A	L	N	L	H	A	W	R	P	S	V	P	E	V	G	E	H	P	E
Template Known Secondary structure		T			.	.	S											S			.	.	.	.	.	.	.	.	.	.	.	.									T	S	S	S									T													G	G	G	B	T	T	B		G	G	G	T	T
Template Predicted Secondary structure					.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.													.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
						172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	Q	I	G	N	G	F	T	E	L	A	L	S	M	G	W	H	L	R	L	R	T	D	V
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		P	T	P	D	S	A	D	E	W	L	A	P	R	Y	A	E	A	G	W	K	L	A	D	C	R	Y	L
Template Known Secondary structure																		T	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions