Job Description P31825 Confidence 99.71% Date Wed Jan 25 15:20:49 GMT 2012 Rank 117 Aligned Residues 212 % Identity 15% Template c3m4xA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nol1/nop2/sun family protein; PDBTitle: structure of a ribosomal methyltransferase Resolution 2.28 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	F	K	Q	F	F	V	A	H	D	R	C	A	M	K	V	G	T	D	G	I	L	L	G	A	W	A	P	V	A	G	V	K	R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	D	S	V	M	I	D	A	V	E	L	E	S	E	A	A	A	Q	A	Q	E	N	I	N	Q	S
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.
Template Sequence		H	Q	A	G	Y	E	Y	S	Q	E	P	S	.	.	.	.	.	.	.	.	A	X	I	V	G	T	A	A	A	A	K	P	G	E	K	V	L	D	L	C	A	A	P	G	G	K	S	T	Q	L	A	A	Q	X	K	G	K	G	L	L	V	T	N	E	I	F	P	K	R	A	K	I	L	S	E	N	I	E	R	W
Template Known Secondary structure				T	T	S						T	T	.	.	.	.	.	.	.	.	T											T	T						S	S		T	T												T	T		S							S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.
Query Sequence		P	W	A	E	R	I	N	V	H	T	A	D	I	Q	Q	W	I	T	Q	Q	T	V	R	F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	.	.	.	.	.	P	S	L	L	T	C	A	A	E	C	I	T	E	E	G	F	F	C	V
Query Conservation																																																										.	.	.	.	.
Alig confidence				.																																																						.	.	.	.	.
Template Conservation				.
Template Sequence		G	V	.	S	N	A	I	V	T	N	H	A	P	A	E	L	V	P	H	F	S	G	F	F	D	R	I	V	V	D	A	P	C	S	G	E	G	X	F	R	K	D	P	N	A	I	K	E	W	T	E	E	S	P	L	Y	C	Q	K	R	Q	Q	E	I	L	S	S	A	I	K	X	L	K	N	K	G	Q	L	I	Y
Template Known Secondary structure		T		.	S	S																T	T														G	G	G	T	T	T										T	T																			T
Template Predicted Secondary structure				.
Template SS confidence
		154	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		168	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure				.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	.	.	.	.	P	E	Q	I	G	N	G	F	T	E	L	A	L	S	M	G	W	H	L	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	D	V	A	E	N	E	A	R	L	P	H	R	V	L	L	A	F	S	P	Q	A	G	E	C	F	S	D	R	L
Query Conservation				.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation																																																																																	.
Template Sequence		S	T	C	T	F	A	P	E	E	N	E	E	I	I	S	W	L	V	E	N	Y	P	V	T	I	E	E	I	P	L	T	Q	S	V	S	S	G	R	S	E	W	G	S	V	A	G	L	E	K	T	I	R	I	W	P	H	K	D	Q	G	E	G	H	F	V	A	K	L	T	F	H	G	Q	N	Q	X	H	K	V	.
Template Known Secondary structure				S				G	G	G	T											S	S									S	S							G	G	G	S	S	S	T	T	G	G	G	S					T	T	T	S	S	S	S											S								.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	R	G	P	D	Q	N	Y	S	E	A	Y	T	A	L	T	Q	A	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	Q	X	T	K	E	Q	E	K	L	W	T	E	F
Template Known Secondary structure		.	.	.	.	.	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									321	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions