Job Description P31825 Confidence 99.61% Date Wed Jan 25 15:20:49 GMT 2012 Rank 179 Aligned Residues 142 % Identity 11% Template c3lcvB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sisomicin-gentamicin resistance methylase sgm; PDBTitle: crystal structure of antibiotic related methyltransferase Resolution 2.00 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	G	I	L	L	G	A	W	A	P	V	A	G	V	K	R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	D	S	V	M	I	D	A	V	E	L	E	S	E	A	A	A	Q	A	Q	E	N	I	N	Q	S	P	W	A	E	R	I	N	V	H	T	A	D	I	Q	Q	W	I	T
Query Conservation
Alig confidence																																						.																																									.	.	.
Template Conservation																																						.																																									.	.	.
Template Sequence		L	D	E	F	Y	R	E	L	F	R	H	L	P	R	P	N	T	L	R	D	L	A	C	G	L	N	P	L	A	A	P	W	X	G	L	P	.	A	E	T	V	Y	I	A	S	D	I	D	A	R	L	V	G	F	V	D	E	A	L	T	R	L	N	V	P	H	R	T	N	V	A	D	L	L	E	D	R	.	.	.
Template Known Secondary structure										G	G	G	S				S					T	T		T	T	G	G	G			T	T	T	T			.	T	T								S	B														T	T										T	T	T	S		.	.	.
Template Predicted Secondary structure																																						.																																									.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		Q	Q	T	V	R	F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	P	S	L	L	T	C	A	A	E	C	I	T	E	E	G	F	F	C	V	V	L	P	.	.	.	E	Q	I	G	N	G	F	T	E	L	A	L	S	M	G	W	H
Query Conservation																																																														.	.	.
Alig confidence		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	L	D	E	P	A	D	V	T	L	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	L	P	C	L	E	T	Q	Q	R	G	S	G	W	E	V	I	D	I	V	N	S	P	N	I	V	V	T	F	P	T	K	G	X	F	Q	N	Y	S	Q	S	F	E	S	Q	A	R	E	R	S	C	R
Template Known Secondary structure		.			S			S					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									S	T	T									S	S		S																											T
Template Predicted Secondary structure		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			188	.	190	.	.	.	.	.	.	.	.																.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		188	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	R	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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