Job Description P31825 Confidence 99.83% Date Wed Jan 25 15:20:49 GMT 2012 Rank 39 Aligned Residues 154 % Identity 14% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.
Predicted Secondary structure																																																												.																		.	.	.
Query SS confidence																																																												.																		.	.	.
Query Sequence		A	W	A	P	V	A	G	V	K	R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	D	S	V	M	I	D	A	V	E	L	E	S	E	A	A	A	Q	A	Q	E	N	I	N	Q	S	P	W	A	.	E	R	I	N	V	H	T	A	D	I	Q	Q	W	I	T	Q	Q	.	.	.	T
Query Conservation																																																												.																		.	.	.
Alig confidence																																.	.																											.																		.	.	.
Template Conservation																																.	.
Template Sequence		A	T	R	R	Y	V	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	X	G	G	C	.	.	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	R	G
Template Known Secondary structure								T	T							T		T	T	T									T	T		.	.	S							S															T	T			G	G	G						S												T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.
Query Sequence		V	R	F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	P	S	L	L	T	C	A	A	E	C	I	T	E	E	G	F	F	C	V	V	.	.	.	.	.	.	L	P	E	Q	I	G	N	G	F	T	E	L	A	L	S	M	G	W	H
Query Conservation																																																									.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		E	K	F	D	V	I	V	X	D	P	P	K	F	V	E	N	K	.	.	.	.	.	.	.	.	S	Q	L	X	G	A	C	R	G	Y	K	D	I	N	X	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C	S	G	L	X	T	S	D	L	F	Q	K	I	I	A	D	A	A	I	D	A	G	R	D
Template Known Secondary structure												S	S		S	S	T	T	.	.	.	.	.	.	.	.		S	S	S				T												T														T	T																		T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.									.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	R	T	D	V	A	E	N	E	A	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	F	I	E	Q	F	R	Q	A	A	D	H	P
Template Known Secondary structure												T	T	S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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