Job Description P31825 Confidence 99.57% Date Wed Jan 25 15:20:49 GMT 2012 Rank 200 Aligned Residues 141 % Identity 12% Template c3b89A_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: crystal structure of rrna methylase from escherichia coli Resolution 2.60 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	G	A	W	A	P	V	A	G	V	K	R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	D	S	V	M	I	D	A	V	E	L	E	S	E	A	A	A	Q	A	Q	E	N	I	N	Q	S	P	W	A	E	R	I	N	V	H	T	A	D	I	Q	Q	W	I	T	Q	Q	T	V
Query Conservation
Alig confidence																															.	.	.	.																												.	.															.	.
Template Conservation																															.	.	.	.																												.	.															.	.
Template Sequence		L	Y	D	F	I	F	S	A	E	T	P	R	R	V	L	D	I	A	C	G	L	N	P	L	A	L	Y	E	R	.	.	.	.	G	I	A	S	V	W	G	C	D	I	H	Q	G	L	G	D	V	I	T	P	F	A	R	E	K	D	W	.	.	D	F	T	F	A	L	Q	D	V	L	C	A	P	P	.	.	A	E
Template Known Secondary structure								S	S				S						T		T	T	T						T	T	.	.	.	.	T		S							S	B													T	T	T		.	.									T	T	T	S			.	.
Template Predicted Secondary structure																															.	.	.	.																												.	.															.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	P	S	L	L	T	C	A	A	E	C	I	T	E	E	G	F	F	C	V	V	L	P	E	Q	I	G	N	G	F	T	E	L	A	L	S	M	G	W	H	L	R	L	R	T	D	V
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	D	L	A	L	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	L	P	L	L	E	R	E	Q	A	G	S	A	X	A	L	L	Q	S	L	N	T	P	R	X	A	V	S	F	P	T	R	S	E	A	N	Y	A	A	W	F	E	G	G	L	P	A	E	F	E	I	E	D	K	K	T
Template Known Secondary structure		B		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									S	T	T								T		B		S								S					S											T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.																.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		195	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	T	E
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions