Job Description P31825 Confidence 98.35% Date Wed Jan 25 15:20:49 GMT 2012 Rank 289 Aligned Residues 120 % Identity 15% Template c2wa1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:non-structural protein 5; PDBTitle: structure of the methyltransferase domain from modoc virus,2 a flavivirus with no known vector (nkv) Resolution 2.00 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		V	A	G	V	K	R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	D	S	V	M	I	D	A	V	E	L	E	S	E	A	A	A	Q	A	Q	E	N	I	N	Q	S	P	W	A	E	R	I	N	V	H	T	A	D	I	Q	Q	W	I	.	.	.	.	.	.	T	Q	Q	T	V	R
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																												.													.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																												.													.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	L	K	G	T	V	V	D	L	G	C	G	R	G	S	W	S	Y	Y	A	A	S	Q	P	N	.	V	R	E	V	K	A	Y	T	L	G	T	S	.	.	.	.	.	.	.	.	.	.	G	H	E	K	P	R	L	V	E	T	F	G	W	N	L	I	T	F	K	S	K	V	D	V	T	K	M	E	P	F	Q
Template Known Secondary structure												T		T	T	S								T	S	T	T	.											S	T	.	.	.	.	.	.	.	.	.	.	T	S									T	T	G	G	G						S			T	T	T
Template Predicted Secondary structure																												.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	P	S	L	L	T	C	A	A	E	C	I	T	.	.	E	E	G	F	F	C	V	V	L	P	E	Q	I	G	N	G	F	T	E	L	A	L	S
Query Conservation																																															.	.
Alig confidence										.	.	.	.	.														.	.	.	.	.	.														.	.
Template Conservation										.	.	.	.	.														.	.	.	.	.	.
Template Sequence		A	D	T	V	L	C	D	I	.	.	.	.	.	G	E	S	N	P	T	A	A	V	E	A	S	R	.	.	.	.	.	.	T	L	T	V	L	N	V	I	S	R	W	L	E	Y	N	Q	G	C	G	F	C	V	K	V	L	N	P	Y	S	C	D	V	L	E	A	L	M	K
Template Known Secondary structure			S							.	.	.	.	.					S	S								.	.	.	.	.	.															S	T	T								S				S
Template Predicted Secondary structure										.	.	.	.	.														.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions