Job Description P31825 Confidence 99.51% Date Wed Jan 25 15:20:49 GMT 2012 Rank 223 Aligned Residues 159 % Identity 16% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		F	V	A	H	D	R	C	A	M	K	V	G	T	D	.	.	G	I	L	L	G	A	W	A	P	V	A	G	V	K	R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	D	S	V	M	I	D	A	V	E	L	E	S	E	A	A	A	Q	A	Q	E	N	I	N	Q	S	P	W	A	E
Query Conservation																.	.
Alig confidence																.	.																																			.	.	.																										.
Template Conservation																																																				.	.	.																										.
Template Sequence		Y	L	I	H	P	N	S	F	F	Q	T	N	S	Y	Q	A	V	N	L	V	R	K	V	S	E	L	V	E	G	E	K	I	L	D	M	Y	S	G	V	G	T	F	G	I	Y	L	A	K	R	G	.	.	.	F	N	V	K	G	F	D	S	N	E	F	A	I	E	M	A	R	R	N	V	E	I	N	N	V	.	D
Template Known Secondary structure						T	T	S				S	B																	S	S						T		T	T	T								T	T	T	.	.	.								S															T	T		.
Template Predicted Secondary structure																																																				.	.	.																										.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		R	I	N	V	H	T	A	D	I	Q	Q	W	I	T	Q	Q	T	V	R	F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	P	S	L	L	T	C	A	A	E	C	I	T	E	E	G	F	F	C	V	.	V	L	P	E	Q	I	G	N
Query Conservation																																																																									.
Alig confidence																.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.									.
Template Conservation																.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		A	E	F	E	V	A	S	D	R	E	V	S	V	K	.	.	.	.	G	F	D	T	V	I	V	D	P	P	R	A	G	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	L	V	K	R	L	N	R	E	.	K	P	G	V	I	V	Y	V	S	C	N	P	E	T	F	A	R
Template Known Secondary structure									T	T	T				T	.	.	.	.	T		S								T	T		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.			S							S
Template Predicted Secondary structure																.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.	340	.	.	.	.	.	.	.																				.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	E	L	A	L	S	M	G	W	H	L	R	L	R	T	D	V	A	E	N	E	A	R	L	P	H	R	V	L	L	A	F
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		D	V	K	M	L	.	.	.	.	D	Y	R	I	D	E	I	V	A	L	D	M	F	P	H	T	P	H	V	E	L	V	A	K	L
Template Known Secondary structure						T	.	.	.	.	T												S	T	T	S	S
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		375	.	.	.	.					380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions