Job Description P31825 Confidence 97.94% Date Wed Jan 25 15:20:49 GMT 2012 Rank 299 Aligned Residues 144 % Identity 15% Template c2px2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:genome polyprotein [contains: capsid protein c PDBTitle: crystal structure of the murray valley encephalitis virus2 ns5 2'-o methyltransferase domain in complex with sah3 (monoclinic form 1) Resolution 2.00 Å

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		19	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure									.														.	.	.	.
Query SS confidence									.														.	.	.	.
Query Sequence		F	V	A	H	D	R	C	.	A	M	K	V	G	T	D	G	I	L	L	G	A	.	.	.	.	W	A	P	V	A	G	V	K	R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	D	S	V	M	I	D	A	V	E	L	E	S	E	A	A	A	Q	A	Q	E	N	I	N	Q	S	P
Query Conservation									.														.	.	.	.
Alig confidence									.														.	.	.	.		.																											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	E	V	D	R	T	E	A	H	P	V	S	R	G	T	A	K	L	R	W	L	V	E	R	R	.	F	V	Q	P	I	G	K	V	V	D	L	G	C	G	R	G	G	W	S	Y	Y	A	A	T	M	K	.	N	V	Q	E	V	R	G	Y	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Template Known Secondary structure							T	T	T				S	S	S											T	T	.	S											T		T	T	S							T	T	S	T	.	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.																											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.																.
		94	.	.	.	.												.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	A	E	R	I	.	.	.	.	.	.	.	.	.	.	.	N	V	H	T	A	D	I	Q	Q	W	I	T	Q	Q	T	V	R	F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	P	S	L	L	T	C	A	A	E	C	I	T	E	E
Query Conservation							.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.															.	.	.	.	.	.
Template Sequence		G	P	G	H	E	E	P	M	L	M	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	Y	K	P	S	E	I	S	D	T	L	L	C	D	.	.	.	.	.	I	G	E	S	S	P	S	A	E	I	E	E	Q	R	.	.	.	.	.	.	T	L	R	I	L	E	M	V	S	D	W	L	S	R	G
Template Known Secondary structure		S	T	T	S								S	T	T	G	G	G						S			G	G	G	S						S						.	.	.	.	.						S									.	.	.	.	.	.													T	T
Template Predicted Secondary structure																																										.	.	.	.	.															.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
			163	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure		.						.	.	.	.
Query SS confidence		.						.	.	.	.
Query Sequence		.	G	F	F	C	V	.	.	.	.	V	L	P	E	Q	I	G	N	G	F	T	E	L	A	L	S	M	G	W	H	L	R	L
Query Conservation		.						.	.	.	.
Alig confidence		.						.	.	.	.
Template Conservation
Template Sequence		P	K	E	F	C	I	K	I	L	C	P	Y	M	P	K	V	I	E	K	L	E	S	L	Q	R	R	F	G	G	G	L	V	R
Template Known Secondary structure			S							S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions