Job Description P31825 Confidence 99.20% Date Wed Jan 25 15:20:49 GMT 2012 Rank 272 Aligned Residues 156 % Identity 17% Template c2plwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna methyltransferase, putative; PDBTitle: crystal structure of a ribosomal rna methyltransferase, putative, from2 plasmodium falciparum (pf13_0052). Resolution 1.70 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																				.																																											.	.	.
Query SS confidence																																				.																																											.	.	.
Query Sequence		L	L	G	A	W	A	P	V	A	G	V	K	R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	D	.	S	V	M	I	D	A	V	E	L	E	S	E	A	A	A	Q	A	Q	E	N	I	N	Q	S	P	W	A	E	R	I	N	V	H	T	A	D	I	Q	Q	W	I	T	.	.	.
Query Conservation																																				.																																											.	.	.
Alig confidence																																				.												.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	N	K	Y	L	F	L	K	K	N	K	I	I	L	D	I	G	C	Y	P	G	S	W	C	Q	V	I	L	E	R	T	K	N	Y	K	N	K	I	I	G	I	D	K	K	I	.	.	.	.	.	.	.	.	.	.	.	.	M	D	P	I	P	N	V	Y	F	I	Q	G	E	I	G	K	D	N	M	N	N	I
Template Known Secondary structure											T	T							S		T	T											T	T	T	S									S	S		.	.	.	.	.	.	.	.	.	.	.	.					T	T								T	T	T	T	S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.													.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
												111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																										.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																																										.
Query Sequence		.	.	.	.	.	.	.	.	.	.	Q	Q	T	V	R	F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	P	S	L	L	T	C	A	A	E	C	I	T	E	E	G	F	F	C	V	.	V	L	P	E	Q	I	G	N	G	F	T	E
Query Conservation		.	.	.	.	.	.	.	.	.	.																																																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.																					.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		N	S	V	D	Y	K	L	K	E	I	L	Q	D	K	K	I	D	I	I	L	S	D	A	A	V	P	C	I	G	N	K	I	D	D	H	L	N	S	C	E	L	.	.	.	.	.	.	T	L	S	I	T	H	F	M	E	Q	Y	I	N	I	G	G	T	Y	I	V	K	M	Y	L	G	S	Q	T	N	N	L	K	T
Template Known Secondary structure													T	T																S													.	.	.	.	.	.																									S	T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	S	M	G	W	H	L	R	L	R	T	D	V	A	E	N	E	A	R	L	P	H	R	V	L	L	A	F	S	P	Q
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		Y	L	K	G	M	.	.	.	.	F	Q	L	V	H	T	T	K	P	K	S	R	E	I	Y	L	V	C	K	N	F	L	G	R
Template Known Secondary structure					T	T	.	.	.	.
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		166	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions