Return to main results Retrieve Phyre Job Id

Job DescriptionP31825
Confidence99.52%DateWed Jan 25 15:20:49 GMT 2012
Rank219Aligned Residues100
% Identity17%Templatec2gs9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:hypothetical protein tt1324; PDBTitle: crystal structure of tt1324 from thermus thermophilis hb8
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90.........100.........110.........120.
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  VAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTADIQQWITQQTVRFDLIIS
Query Conservation     
 









  

 

 
      
 




   
  
  
    

   
                  
    
Alig confidence 






















.....





















.......






















Template Conservation     
  






 
        .....    
 
               .......                  
 
  
Template Sequence  LPPGESLLEVGAGTGYWLRRLPY. . . . . PQKVGVEPSEAXLAVGRRRAPE. . . . . . . ATWVRAWGEALPFPGESFDVVLL
Template Known Secondary structure 



ST
TT



.....S



TT.......S


TTS

S
SS
Template Predicted Secondary structure 











.....















.......

















Template SS confidence 















































































   35....40.........50....... ..60.........70......... 80.........90.........100..
 
   122.......130.........140.........150.........160.........170
Predicted Secondary structure 























Query SS confidence 
















































Query Sequence  NPPYYQQGVECSTPQREQARYTTTLDHPSLLTCAAECITEEGFFCVVLP
Query Conservation 



              
           
      




    
  
Alig confidence  .................































Template Conservation  .................   
         
 
  






 
 
   
Template Sequence  . . . . . . . . . . . . . . . . . FTTLEFVEDVERVLLEARRVLRPGGALVVGVL
Template Known Secondary structure  .................S
TTT
S
Template Predicted Secondary structure  .................








Template SS confidence 
















































   103......110.........120.........130....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions