Job Description P31825 Confidence 99.64% Date Wed Jan 25 15:20:49 GMT 2012 Rank 169 Aligned Residues 199 % Identity 15% Template c2frxD_ PDB info PDB header:transferase Chain: D: PDB Molecule:hypothetical protein yebu; PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli Resolution 2.90 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		F	T	F	K	Q	F	F	V	A	H	D	R	C	A	M	K	V	G	T	D	G	I	L	L	G	A	W	A	.	.	P	V	A	G	V	K	R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	D	S	V	M	I	D	A	V	E	L	E	S	E	A	A	A	Q	A	Q	E	N	I	N
Query Conservation																														.	.
Alig confidence														.	.	.	.	.	.	.	.									.	.
Template Conservation														.	.	.	.	.	.	.	.
Template Sequence		H	L	S	G	L	F	Y	I	Q	E	A	S	.	.	.	.	.	.	.	.	S	X	L	P	V	A	A	L	F	A	D	G	N	A	P	Q	R	V	X	D	V	A	A	A	P	G	S	K	T	T	Q	I	S	A	R	X	N	N	E	G	A	I	L	A	N	E	F	S	A	S	R	V	K	V	L	H	A	N	I	S
Template Known Secondary structure				T	T	S								.	.	.	.	.	.	.	.										T	T	T				S					S	S		T	T	S										T	T	T		S							S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.									.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		Q	S	P	W	A	E	R	I	N	V	H	T	A	D	I	Q	Q	W	I	T	Q	Q	T	V	R	F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	.	.	.	.	.	P	S	L	L	T	C	A	A	E	C	I	T	E	E	G	F	F
Query Conservation																																																												.	.	.	.	.
Alig confidence						.																																																						.	.	.	.	.
Template Conservation						.
Template Sequence		R	C	G	I	.	S	N	V	A	L	T	H	F	D	G	R	V	F	G	A	A	V	P	E	X	F	D	A	I	L	L	D	A	P	C	S	G	E	G	V	V	R	K	D	P	D	A	L	K	N	W	S	P	E	S	N	Q	E	I	A	A	T	Q	R	E	L	I	D	S	A	F	H	A	L	R	P	G	G	T	L
Template Known Secondary structure				T		.		S								S	T	T					S	T	T														G	G	G	G	G	T		T	T	S	S	S	S																							T
Template Predicted Secondary structure						.
Template SS confidence
		164	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		166	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure						.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	V	V	L	.	.	.	.	P	E	Q	I	G	N	G	F	T	E	L	A	L	S	M	G	W	H	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	T	D	V	A	E	N	E	A	R	L	P	H	R	V	L	L	A	F	S	P	Q	A	G	E	C	F	S	D	R
Query Conservation						.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Y	S	T	C	T	L	N	Q	E	E	N	E	A	V	C	L	W	L	K	E	T	Y	P	D	A	V	E	F	L	P	L	G	D	L	F	P	G	A	N	K	A	L	T	E	E	G	F	L	H	V	F	P	Q	I	Y	D	C	E	G	F	F	V	A	R	L	R	K	T	Q	A	I	P	A	L	P	A
Template Known Secondary structure						S			S	S	T	T	T											S	T	T	T							T	T	S	S	T	T	G	G	G	G	B		T	T	S						T	T	T	T	T	S												S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions