|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Q | S | T | S | V | L | R | R | N | G | F | T | F | K | Q | F | F | V | A | H | D | R | C | A | M | K | V | G | T | D | G | I | L | L | G | A | W | A | P | V | A | G | V | K | R | C | L | D | I | G | A | G | S | G | L | L | A | L | M | L | A | Q | R | T | D | D | S | V | M | I | D | A | V | E | L | E | S | E | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
| . | . | . | . | . | . | . | . |
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|
|
|   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |   | . |   |   |   |   |
|   |
|   |
|   |   |   |   |
|
Template Sequence |   |
E | T | P | A | P | V | H | A | L | P | G | F | E | D | G | W | V | T | V | Q | D | A | S | . |
. |
. |
. |
. |
. |
. |
. |
A | Q | G | C | M | T | W | L | A | P | Q | N | G | E | H | I | L | D | L | C | A | A | P | G | G | K | T | T | H | I | L | E | V | A | . |
P | E | A | Q | V | V | A | V | D | I | D | E | Q | R |
Template Known Secondary structure |   |
S | S |
|
|
| G | G | G | S | T | T | G | G | G | T | S |  |  |  |
|
|  |  | . | . | . | . | . | . | . | . |  |  | T |  |  |  |  |  |
|
|
| T | T |
|  |  |  |  |  | S |
| T | T |
|  |  |  |  |  |  |  |  |  |
| . | T | T |
|  |  |  |  |  |  | S | S | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
212 | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
. | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 150 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | Q | A | Q | E | N | I | N | Q | S | P | W | A | E | R | I | N | V | H | T | A | D | I | Q | Q | W | I | T | Q | Q | T | V | R | F | D | L | I | I | S | N | P | P | Y | Y | Q | Q | G | V | E | C | S | T | P | Q | R | E | Q | A | R | Y | T | T | T | L | D | H | . |
. |
. |
. |
. |
P | S | L | L | T | C | A | A |
Query Conservation |   |
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |
Template Sequence |   |
L | S | R | V | Y | D | N | L | K | R | L | G | M | K | A | T | V | K | Q | G | D | G | R | Y | P | S | Q | W | . |
C | G | E | Q | Q | F | D | R | I | L | L | D | A | P | C | S | A | T | G | V | I | R | R | H | P | D | I | K | W | L | R | R | D | R | D | I | P | E | L | A | Q | L | Q | S | E | I | L | D | A | I | W |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |
|
| T | T |
| T |  |  |  | . |  | T | T |
|
|  |  |  |  |  |  |  |
|
|
|
|
| G | G | G | T | T | T |
| T | T |  |  |  |  |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
283 | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | |
. | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . |
  |
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
|
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | C | I | T | E | E | G | F | F | C | V | V | L | . |
. |
. |
. |
P | E | Q | I | G | N | G | F | T | E | L | A | L | S | M | G |
Query Conservation |   |
  |   |
|
|
|
|
|   |   |   |   |
|   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |
Template Sequence |   |
P | H | L | K | T | G | G | T | L | V | Y | A | T | C | S | V | L | P | E | E | N | S | L | Q | I | K | A | F | L | Q | R | T | A |
Template Known Secondary structure |   |
G | G |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| G | G | G | T |  |  |  |  |  |  |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
362 | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . |
  |