Return to main results Retrieve Phyre Job Id

Job DescriptionP69228
Confidence22.18%DateThu Jan 5 12:11:20 GMT 2012
Rank410Aligned Residues24
% Identity25%Templated1smyf2
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210....
Predicted Secondary structure 







Query SS confidence 























Query Sequence  DDYRVVTDRTIDSHIKNLRRKLES
Query Conservation           

   
 


 

  
Alig confidence 























Template Conservation 
  



   
     


 


 
Template Sequence  GAFFGVTRERIRQIENKALRKLKY
Template Known Secondary structure  TTSSSS
Template Predicted Secondary structure 


Template SS confidence 























   387..390.........400.........410
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions