Job Description P69228 Confidence 73.78% Date Thu Jan 5 12:11:20 GMT 2012 Rank 201 Aligned Residues 70 % Identity 20% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		M	L	D	L	T	P	A	E	F	R	L	L	K	T	L	S	H	E	P	G	K	V	F	S	R	E	Q	L	L	N	H	L	Y	D	D	Y	R	V	V	T	D	R	T	I	D	S	H	I	K	N	L	R	R	K	L	E	S	L	D	A	E	Q	S	F	I	R	A	V	Y	.	G	V	G	Y	R	W	E	A	D	A
Query Conservation																																																																							.
Alig confidence																					.	.														.																				.	.	.	.	.	.	.	.								.
Template Conservation																					.	.														.																				.	.	.	.	.	.	.	.
Template Sequence		Q	V	E	I	S	X	A	E	W	D	V	X	N	I	I	W	D	K	K	.	.	S	V	S	A	N	E	I	V	V	E	I	Q	K	.	Y	K	E	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	.	.	.	.	.	.	.	.	E	I	I	K	R	Y	K	S	E	N	I	Y	F	Y	S	S	N	I
Template Known Secondary structure																			S	S	.	.	S												T	.	T	S																	T	.	.	.	.	.	.	.	.	T	S							T	T								S
Template Predicted Secondary structure																					.	.														.																				.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		237	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		74	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions