Job Description P69228 Confidence 80.76% Date Thu Jan 5 12:11:20 GMT 2012 Rank 185 Aligned Residues 72 % Identity 14% Template d1p6ra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution UNK

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		G	K	M	L	D	L	T	P	A	E	F	R	L	L	K	T	L	S	H	E	P	G	K	V	F	S	R	E	Q	L	L	N	H	L	Y	D	D	Y	R	V	V	T	D	R	T	I	D	S	H	I	K	N	L	R	R	K	L	E	S	L	D	A	E	Q	S	F	I	R	A	V	Y	.	G	V	G	Y	R	W	E	A
Query Conservation																																																																									.
Alig confidence																							.	.												.																						.	.	.	.	.	.	.	.								.
Template Conservation																							.	.												.																						.	.	.	.	.	.	.	.
Template Sequence		K	K	I	P	Q	I	S	D	A	E	L	E	V	M	K	V	I	W	K	H	S	.	.	S	I	N	T	N	E	V	I	K	E	L	.	S	K	T	S	T	W	S	P	K	T	I	Q	T	M	L	L	R	L	I	K	K	.	.	.	.	.	.	.	.	G	A	L	N	H	H	K	E	G	R	V	F	V	Y	T	P
Template Known Secondary structure																				T	S	S	.	.	S											.				S																	T	.	.	.	.	.	.	.	.	T	S							T	T
Template Predicted Secondary structure																							.	.												.																						.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		235	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	D	E
Template Known Secondary structure		S		S	S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions