Return to main results Retrieve Phyre Job Id

Job DescriptionP69228
Confidence31.00%DateThu Jan 5 12:11:20 GMT 2012
Rank363Aligned Residues55
% Identity15%Templated1jw1a1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Transferrin
Resolution4.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10...... ...20.........30... ......40.........50.........60.
Predicted Secondary structure 




.



...








Query SS confidence 









.
















. . .



























Query Sequence  DENTPRILIV. EDEPKLGQLLIDYLRAA. . . SYAPTLISHGDQVLPYVRQTPPDLILLD
Query Conservation       




.


      
   
   ...
  
  
    


        





Alig confidence 









.
















...



























Template Conservation 
   




 
  
  

  
         
   

   
   

  
  
 

   

Template Sequence  PRKNVRWCAISLPEWSKCYQWQRRMRKLGAPSITCVRRTSVLECIRAIAGKNADAVTLD
Template Known Secondary structure  TTSS
SSSTTTSSSSS



STTTTTTTSS



Template Predicted Secondary structure 


















Template SS confidence 


























































   2.......10.........20.........30.........40.........50.........60
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions