Job Description P69228 Confidence 29.17% Date Thu Jan 5 12:11:20 GMT 2012 Rank 375 Aligned Residues 57 % Identity 19% Template c3t72o_ PDB info PDB header:transcription/dna Chain: O: PDB Molecule:pho box dna (strand 1); PDBTitle: phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-dna transcription2 activation sub-complex Resolution 4.33 Å

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		160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		D	L	T	P	A	E	F	R	L	L	K	.	T	L	S	H	E	P	G	K	V	F	S	R	E	Q	L	L	N	H	L	Y	D	D	Y	R	V	V	T	D	R	T	I	D	S	H	I	K	N	L	R	R	K	L	E	S	L	D	A	E	Q	S	F
Query Conservation													.
Alig confidence													.																				.	.	.	.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		G	L	T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	N	T	D	Y	T	L	E	E	V	G	K	Q	F	.	.	.	.	.	D	V	T	R	E	R	I	R	Q	I	E	A	K	A	L	R	K	L	R	H	P	S	R	S	E	V	L
Template Known Secondary structure			S								T	T	T	T	T	S	S	S	S		S												.	.	.	.	.	S	S																		S	S
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580						.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions