Job Description P69228 Confidence 34.22% Date Thu Jan 5 12:11:20 GMT 2012 Rank 341 Aligned Residues 82 % Identity 10% Template c3n0wA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc branched chain amino acid family transporter, PDBTitle: crystal structure of a branched chain amino acid abc transporter2 periplasmic ligand-binding protein (bxe_c0949) from burkholderia3 xenovorans lb400 at 1.88 a resolution Resolution 1.88 Å

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		9	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence													.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		N	T	P	R	I	L	I	V	E	D	E	.	.	.	.	P	K	L	G	Q	L	L	I	D	Y	L	R	A	A	S	Y	A	P	T	L	I	S	.	.	.	.	.	.	.	H	G	D	Q	V	L	P	Y	V	R	Q	T	P	P	D	L	I	L	L	D	L	M	L	P	G	T	D	G	L	T	L	C	R	E	I	R
Query Conservation													.	.	.	.																							.	.	.	.	.	.	.
Alig confidence													.	.	.	.																							.	.	.	.	.	.	.																					.	.
Template Conservation																																																																		.	.
Template Sequence		G	Y	K	T	W	F	L	X	L	P	D	A	A	Y	G	D	L	X	N	A	A	I	R	R	E	L	T	A	G	G	G	Q	I	V	G	S	V	R	F	P	F	E	T	Q	D	F	S	S	Y	L	L	Q	A	K	A	S	G	A	Q	L	I	V	S	T	.	.	S	G	G	A	A	N	I	N	I	X	K	Q	A	R
Template Known Secondary structure		T										S	S																		T											T	T															T		S						.	.
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	S	D	I	P	I	V	M	V	T	A	K	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	G	L	P	S	K	T	Q	K	V	G	G	X	I
Template Known Secondary structure			T	T		S		S	S							B
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions