Return to main results Retrieve Phyre Job Id

Job DescriptionP69228
Confidence99.84%DateThu Jan 5 12:11:20 GMT 2012
Rank69Aligned Residues118
% Identity25%Templatec3khtA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator from hahella chejuensis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30..... ....40.........50.........60.........70.........80 ....
Predicted Secondary structure 







..

























...



Query SS confidence 

























. .












































. . .



Query Sequence  TPRILIVEDEPKLGQLLIDYLRAASY. . APTLISHGDQVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFS. . . DIPI
Query Conservation    







      
   
   
 .. 
  
    


        





  

   
       
   ...    
Alig confidence 

























..












































...



Template Conservation 








           
   
    
  
    


  
     



 
  

   
      

       
 
Template Sequence  SKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVXSAVRKPGANQHTPI
Template Known Secondary structure 



TT

SSTT


S
TT
GGG
SSSTTTT

Template Predicted Secondary structure 































Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   85....90.........100.........110.... .....120.......
Predicted Secondary structure 




















.



Query SS confidence 





























.












Query Sequence  VMVTAKIEEIDRLLGLEIGADDYICKPYSP. REVVARVKTILRR
Query Conservation 
 
               
  
 
 

   .  
   
      
Alig confidence 





























.












Template Conservation 
  
              
    
 

      
   
   
  
Template Sequence  VILTDNVSDDRAKQCXAAGASSVVDKSSNNVTDFYGRIYAIFSY
Template Known Secondary structure  TT

TT
S

TTS
Template Predicted Secondary structure 












Template SS confidence 











































   94.....100.........110.........120.........130.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions