Return to main results Retrieve Phyre Job Id

Job DescriptionP69228
Confidence99.81%DateThu Jan 5 12:11:20 GMT 2012
Rank87Aligned Residues127
% Identity21%Templatec3hebB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:response regulator receiver domain protein (chey); PDBTitle: crystal structure of response regulator receiver domain from2 rhodospirillum rubrum
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30...... ...40.........50 .........60.........70.........
Predicted Secondary structure 






..

.........






















Query SS confidence 

























. .













. . . . . . . . .




























Query Sequence  PRILIVEDEPKLGQLLIDYLRAASYA. . PTLISHGDQVLPYV. . . . . . . . . RQTPPDLILLDLMLPGTDGLTLCREIRRF
Query Conservation   







      
   
   
  ..
  
    


   .........     





  

   
       
  
Alig confidence 

























..













.........




























Template Conservation 
 






      
   
   
    
        

  
              





  

   
      

  
Template Sequence  VTIVXIEDDLGHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDXTGIDILKLVKEN
Template Known Secondary structure 



TT



SS
TT
SSGGGTT
B
SB
SSSBS
Template Predicted Secondary structure 

























Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   80 .........90.........100.........110.........120.........130.......
Predicted Secondary structure 
...






































Query SS confidence 
. . .
























































Query Sequence  S. . . DIPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCKPQRELQQQ
Query Conservation   ...    
 
               
  
 
 

     
   
                
Alig confidence 
...
























































Template Conservation         

  
              
    
 

     
   
  
         
   
Template Sequence  PHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQLGLFFSVXQVPETE
Template Known Secondary structure  TTTTTS
S


TT
S

SSTTS


B

Template Predicted Secondary structure 

























Template SS confidence 




























































   88.90.........100.........110.........120.........130.........140........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions