Job Description P69228 Confidence 29.67% Date Thu Jan 5 12:11:20 GMT 2012 Rank 372 Aligned Residues 96 % Identity 14% Template c3h5lB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:putative branched-chain amino acid abc PDBTitle: crystal structure of a putative branched-chain amino acid2 abc transporter from silicibacter pomeroyi Resolution 1.70 Å

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		12	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure										.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		R	I	L	I	V	E	D	E	.	.	.	.	P	K	L	G	Q	L	L	I	D	Y	L	R	A	A	S	Y	A	P	T	.	.	.	.	.	.	.	L	I	S	H	G	D	Q	V	L	P	Y	V	R	Q	T	P	P	D	L	I	L	L	D	L	M	L	P	G	T	D	G	L	T	L	C	R	E	I	R	R	F	S
Query Conservation										.	.	.	.																				.	.	.	.	.	.	.
Alig confidence										.	.	.	.																				.	.	.	.	.	.	.																							.
Template Conservation																																																														.
Template Sequence		K	I	A	I	I	T	G	P	G	I	Y	S	V	N	I	A	N	A	I	R	D	G	A	G	E	Y	G	Y	D	V	S	L	F	E	T	V	A	I	P	V	S	D	W	G	P	T	L	A	K	L	R	A	D	P	P	A	V	I	V	V	.	T	H	F	Y	P	Q	D	Q	A	L	F	M	N	Q	F	M	T	D	P
Template Known Secondary structure									S	S														G	G	G	G	T											S	S		S												S			S					.																T	T	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	P	I	V	M	V	T	A	K	I	E	E	I	D	R	L	L	G	L	E	I	G	A	D	D	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	S	L	V	Y	L	Q	Y	G	A	S	L	A	A	F	R	D	I	A	G	D	N	S	V	G	V	T
Template Known Secondary structure			S							S	G	G	G	S								G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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