Job Description P69228 Confidence 25.29% Date Thu Jan 5 12:11:20 GMT 2012 Rank 390 Aligned Residues 97 % Identity 6% Template c3eafA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc transporter, substrate binding protein; PDBTitle: crystal structure of abc transporter, substrate binding protein2 aeropyrum pernix Resolution 2.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.										.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																					.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.																					.	.	.	.	.	.	.	.	.
Query Sequence		T	P	R	I	L	I	V	E	D	E	P	K	.	.	.	.	L	G	Q	L	L	I	D	Y	L	R	A	A	S	Y	A	P	T	L	I	S	.	.	.	.	.	.	.	.	.	H	G	D	Q	V	L	P	Y	V	R	Q	T	P	P	D	L	I	L	L	D	L	M	L	P	G	T	D	G	L	T	L	C	R	E	I
Query Conservation														.	.	.	.																					.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																					.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																																																			.	.
Template Sequence		G	K	L	A	L	A	Y	D	S	K	V	A	Y	S	R	S	P	I	G	A	I	K	K	A	A	P	S	L	G	L	Q	V	V	G	D	Y	D	L	P	L	R	A	T	E	A	D	A	E	R	I	A	R	E	X	L	A	A	D	P	D	Y	V	W	C	G	.	.	N	T	I	S	S	C	S	L	L	G	R	A	X
Template Known Secondary structure										T	T						T	T								T	G	G	G	T											T	T															T	T			S						.	.	S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	F	S	D	I	P	I	V	M	V	T	A	K	I	E	E	I	D	R	L	L	G	L	E	I	G	A	D	D	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	V	G	L	D	A	F	L	L	T	N	V	W	G	F	D	E	R	S	P	Q	L	I	G	E	G	G	Y	G	K	V
Template Known Secondary structure					T									G	G	G		S	T	T							G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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