Job Description P69228 Confidence 61.84% Date Thu Jan 5 12:11:20 GMT 2012 Rank 224 Aligned Residues 141 % Identity 12% Template c3axtA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine Resolution 2.49 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.				.
Query SS confidence																										.	.	.				.
Query Sequence		R	I	L	I	V	E	D	E	P	K	L	G	Q	L	L	I	D	Y	L	R	A	A	S	Y	.	.	.	A	P	T	.	L	I	S	H	G	D	Q	V	L	P	Y	V	R	Q	T	P	P	D	L	I	L	L	D	L	M	L	P	G	T	D	G	L	T	L	C	R	E	I	R	R	F	S	D	I	P	I	V	M	V
Query Conservation																										.	.	.				.
Alig confidence																										.	.	.				.																								.	.
Template Conservation																																																								.	.
Template Sequence		K	A	Y	A	N	D	I	S	S	K	A	I	E	I	M	K	E	N	F	K	L	N	N	I	P	E	D	R	Y	E	I	H	G	M	E	A	N	F	F	L	R	K	E	W	G	F	G	F	D	Y	V	D	L	D	.	.	P	F	G	T	P	V	P	F	I	E	S	V	A	L	S	M	K	R	G	G	I	L	S	L
Template Known Secondary structure								S															T	T			G	G	G						S							T	S			S	S									.	.		S	S
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	K	I	E	E	I	D	R	L	L	G	L	E	I	G	A	D	D	Y	I	C	K	P	Y	S	P	R	E	V	V	A	R	V	K	T	I	L	R	R	C	K	P	Q	R	E	L	Q	Q	Q	D	A	E	S	P	L	I	I	D	E	G	R	F	Q	A	S	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	T	D	T	A	P	L	S	G	T	Y	P	K	T	C	M	R	R	Y	M	A	R	P	L	R	N	E	F	K	H	E	V	G	I	R	I	L	I	K	K	V	I	E	L	A	A	Q	Y	D	I	A	M	I	P	I	F	A	Y	S	H	L	H	Y	F	K	L
Template Known Secondary structure										T	T	S	S										S	B				S	T	T																			T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions