Job Description P69228 Confidence 99.63% Date Thu Jan 5 12:11:20 GMT 2012 Rank 127 Aligned Residues 116 % Identity 23% Template c2qsjB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-binding response regulator, luxr family; PDBTitle: crystal structure of a luxr family dna-binding response2 regulator from silicibacter pomeroyi Resolution 2.10 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.																						.
Query SS confidence																								.	.																						.
Query Sequence		R	I	L	I	V	E	D	E	P	K	L	G	Q	L	L	I	D	Y	L	R	A	A	.	.	S	Y	A	P	T	L	I	S	H	G	D	Q	V	L	P	Y	V	R	Q	T	P	.	P	D	L	I	L	L	D	L	M	L	P	G	T	D	G	L	T	L	C	R	E	I	R	R	F	S	D	I	P	I	V	M	V	T
Query Conservation																								.	.																						.
Alig confidence																								.	.																						.																.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		V	V	L	I	V	D	D	H	H	L	I	R	A	G	A	K	N	L	L	E	G	A	F	S	G	M	R	V	E	G	A	E	T	V	S	D	A	L	A	F	L	E	A	D	N	T	V	D	L	I	L	L	D	V	A	I	D	G	L	V	R	.	.	.	.	.	L	K	R	F	D	P	S	N	A	V	A	L	I	S
Template Known Secondary structure								S																	T	T							S	S										T	T				S														.	.	.	.	.						T	T	S
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	I	E	E	I	D	R	L	L	G	L	E	I	G	A	D	D	Y	I	C	K	P	Y	S	P	R	E	V	V	A	R	V	K	T	I	L	R	R	C	K	P	Q	R	E	L
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		G	E	H	.	.	E	L	I	R	A	A	L	E	A	G	A	D	G	F	I	P	K	S	A	D	P	Q	V	L	I	H	A	V	S	L	I	L	E	G	E	I	F	L	P	R	S
Template Known Secondary structure					.	.									T	T		S	B				T	T	S														T	T			B			S
Template Predicted Secondary structure					.	.
Template SS confidence
		84	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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