Job Description P69228 Confidence 29.41% Date Thu Jan 5 12:11:20 GMT 2012 Rank 373 Aligned Residues 53 % Identity 8% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

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		9	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure													.	.	.																								.	.	.	.	.	.	.
Query SS confidence													.	.	.																								.	.	.	.	.	.	.
Query Sequence		N	T	P	R	I	L	I	V	E	D	E	.	.	.	P	K	L	G	Q	L	L	I	D	Y	L	R	A	A	S	Y	A	P	T	L	I	S	H	.	.	.	.	.	.	.	G	D	Q	V	L	P	Y	V	R	Q	T	P	P	D	L	I	L	L	D
Query Conservation													.	.	.																								.	.	.	.	.	.	.
Alig confidence													.	.	.																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	W	K	T	C	L	I	C	A	D	T	F	R	A	G	A	F	D	Q	L	K	Q	N	A	T	K	A	R	I	P	F	Y	G	S	Y	T	E	M	D	P	V	I	I	A	S	E	G	V	E	K	F	K	N	E	N	F	E	I	I	I	V	D
Template Known Secondary structure		T	T											S	S	S														T										S																T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions