Return to main results Retrieve Phyre Job Id

Job DescriptionP69228
Confidence99.74%DateThu Jan 5 12:11:20 GMT 2012
Rank116Aligned Residues104
% Identity21%Templatec2hqnA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.........180.........190.........200.........210.
Predicted Secondary structure 


























































Query SS confidence 















































































Query Sequence  RELQQQDAESPLIIDEGRFQASWRGKMLDLTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRK
Query Conservation                               
   
   
  
        
   
   
          

   
 


 
Alig confidence 















































































Template Conservation 
     
  
 
  
     
      
 

  
  

  
    
  

   
   

          
   
 


 
Template Sequence  GSGSNVIEIGDLTISPDEEKIIYKGREVEVKGKPFEVLTHLARHRDQIVSKEQLLDAIWEEPEMVTPNVIEVAINQIRQK
Template Known Secondary structure 





TTTTTTTT


STT
S

S
GGG
TT
Template Predicted Secondary structure 




























Template SS confidence 















































































   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   212.......220.........230......
Predicted Secondary structure 













Query SS confidence 
























Query Sequence  LESLDAEQSFIRAVYGVGYRWEADA
Query Conservation 
         
 



 

 
    
Alig confidence 




.


















Template Conservation 
    .    
 

 
 



    
Template Sequence  MDKPL. GISTVETVRRRGYRFCYPK
Template Known Secondary structure  TTTTS.




SSS


S
Template Predicted Secondary structure 


.










Template SS confidence 
























   195.... 200.........210........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions