Job Description P69228 Confidence 23.68% Date Thu Jan 5 12:11:20 GMT 2012 Rank 400 Aligned Residues 76 % Identity 16% Template c2hqbA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional activator of comk gene; PDBTitle: crystal structure of a transcriptional activator of comk2 gene from bacillus halodurans Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure							.	.	.																												.	.	.	.	.	.
Query SS confidence							.	.	.																												.	.	.	.	.	.
Query Sequence		L	I	V	E	D	.	.	.	E	P	K	L	G	Q	L	L	I	D	Y	L	R	A	A	S	Y	A	P	T	L	I	S	H	G	D	Q	.	.	.	.	.	.	V	L	P	Y	V	R	Q	T	P	P	D	L	I	L	L	D	L	M	L	P	G	T	D	G	L	T	L	C	R	E	I	R	R	F	S	D	I	P	I
Query Conservation							.	.	.																												.	.	.	.	.	.
Alig confidence							.	.	.																												.	.	.	.	.	.																.	.	.
Template Conservation																																																										.	.	.
Template Sequence		L	L	V	E	D	T	G	W	N	R	K	A	Y	E	G	L	L	N	I	H	S	N	L	D	V	D	V	V	L	E	E	G	V	N	S	E	Q	K	A	H	R	R	I	K	E	L	V	D	G	G	V	N	L	I	F	G	.	.	.	H	G	H	A	F	A	E	Y	F	S	T	I	H	N	Q	Y	P	D	V	H	F
Template Known Secondary structure										T														S												S														T	T							.	.	.		S	T								T	T	T	T	S		T	T	S
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		85	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	V	T	A	K	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	F	N	G	E	V	K
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions