Job Description P69228 Confidence 100.00% Date Thu Jan 5 12:11:20 GMT 2012 Rank 3 Aligned Residues 225 % Identity 39% Template c2gwrA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:dna-binding response regulator mtra; PDBTitle: crystal structure of the response regulator protein mtra from2 mycobacterium tuberculosis Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	N	T	P	R	I	L	I	V	E	D	E	P	K	L	G	Q	L	L	I	D	Y	L	R	A	A	S	Y	A	P	T	L	I	S	H	G	D	Q	V	L	P	Y	V	R	Q	T	P	P	D	L	I	L	L	D	L	M	L	P	G	T	D	G	L	T	L	C	R	E	I	R	R	F	S	D	I	P	I	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	X	R	Q	R	I	L	V	V	D	D	D	A	S	L	A	E	X	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	X	L	P	G	X	N	G	I	D	V	C	R	V	L	R	A	D	S	G	V	P	I	V	X
Template Known Secondary structure													S															T	T									G	G	G											S						S	S		S	S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	K	I	E	E	I	D	R	L	L	G	L	E	I	G	A	D	D	Y	I	C	K	P	Y	S	P	R	E	V	V	A	R	V	K	T	I	L	R	R	C	K	P	Q	R	E	L	Q	Q	Q	D	A	E	S	P	L	I	I	D	E	G	R	F	Q	A	S	W	R	G	K	M	L	D	L	T	P	A	E	F
Query Conservation
Alig confidence																																																	.	.
Template Conservation																																																	.	.
Template Sequence		L	T	A	K	T	D	T	V	D	V	V	L	G	L	E	S	G	A	D	D	Y	I	X	K	P	F	K	P	K	E	L	V	A	R	V	R	A	R	L	R	R	N	D	D	E	P	A	.	.	E	X	L	S	I	A	D	V	E	I	D	V	P	A	H	K	V	T	R	N	G	E	Q	I	S	L	T	P	L	E	F
Template Known Secondary structure					T	T			S								T	T								S																		S	S				.	.						T	T					T	T	T	T					T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	K	T	L	S	H	E	P	G	K	V	F	S	R	E	Q	L	L	N	H	L	Y	D	D	Y	R	V	V	T	D	R	T	I	D	S	H	I	K	N	L	R	R	K	L	E	S	L	D	A	E	Q	S	F	I	R	A	V	Y	G	V	G	Y	R	W	E	A	D
Query Conservation
Alig confidence																													.	.
Template Conservation																													.	.
Template Sequence		D	L	L	V	A	L	A	R	K	P	R	Q	V	F	T	R	D	V	L	L	E	Q	V	W	G	Y	R	.	.	A	D	T	R	L	V	N	V	H	V	Q	R	L	R	A	K	V	E	K	D	P	E	N	P	T	V	V	L	T	V	R	G	V	G	Y	K	A	G	P	P
Template Known Secondary structure										S	T	T			B										T				.	.			T																S	S	T	T	S		S	S					T	T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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