Job Description P69228 Confidence 27.71% Date Thu Jan 5 12:11:20 GMT 2012 Rank 383 Aligned Residues 51 % Identity 29% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	E	F	R	L	L	K	T	L	S	H	E	P	G	K	V	F	S	R	E	Q	L	L	N	H	L	Y	D	D	Y	R	V	V	T	D	R	T	I	D	S	H	I	K	N	L	R	R	K	L	E	S	L	D	A	E	Q	S	F	I	R	A	V	Y	G	V	G	Y
Query Conservation
Alig confidence																													.	.	.	.	.					.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																													.	.	.	.	.					.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		I	T	Y	L	R	I	L	E	E	L	E	A	Q	G	V	H	R	T	S	S	E	Q	L	G	G	L	A	.	.	.	.	.	Q	V	T	A	.	.	.	.	.	.	.	F	Q	V	R	K	D	L	S	Y	F	G	S	Y	G	.	.	.	.	.	T	R	G	V	G	Y
Template Known Secondary structure														T	T														.	.	.	.	.	T	S			.	.	.	.	.	.	.										T	T				.	.	.	.	.		T	T	T
Template Predicted Secondary structure																													.	.	.	.	.					.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions