Return to main results Retrieve Phyre Job Id

Job DescriptionP69228
Confidence95.84%DateThu Jan 5 12:11:20 GMT 2012
Rank150Aligned Residues47
% Identity19%Templatec1x3uA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulatory protein fixj; PDBTitle: solution structure of the c-terminal transcriptional2 activator domain of fixj from sinorhizobium melilot
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   161........170.........180.........190.........200.........210......
Predicted Secondary structure 































Query SS confidence 























































Query Sequence  LTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLD
Query Conservation 
   
   
  
        
   
   
          

   
 


 

    
Alig confidence 












....











.....





















Template Conservation 

  
  

 
  .... 
 
  


  
..... 

  

      
  

 
  
Template Sequence  LSERERQVLSAVV. . . . AGLPNKSIAYDL. . . . . DISPRTVEVHRANVMAKMKAKS
Template Known Secondary structure 
T....TT

T.....TS
TT

S
Template Predicted Secondary structure 

....



.....



Template SS confidence 























































   142.......150.... .....160...... ...170.........180........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions