Job Description P69228 Confidence 34.13% Date Thu Jan 5 12:11:20 GMT 2012 Rank 344 Aligned Residues 54 % Identity 11% Template c1qzwC_ PDB info PDB header:signaling protein/rna Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication Resolution 4.10 Å

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		8	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure														.	.	.																								.	.	.	.	.	.	.
Query SS confidence														.	.	.																								.	.	.	.	.	.	.
Query Sequence		E	N	T	P	R	I	L	I	V	E	D	E	.	.	.	P	K	L	G	Q	L	L	I	D	Y	L	R	A	A	S	Y	A	P	T	L	I	S	H	.	.	.	.	.	.	.	G	D	Q	V	L	P	Y	V	R	Q	T	P	P	D	L	I	L	L	D
Query Conservation														.	.	.																								.	.	.	.	.	.	.
Alig confidence														.	.	.																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	G	Y	K	V	G	L	V	A	A	D	V	Y	R	P	A	A	Y	D	Q	L	L	Q	L	G	N	Q	I	G	V	Q	V	Y	G	E	P	N	N	Q	N	P	I	E	I	A	K	K	G	V	D	I	F	V	K	N	K	M	D	I	I	I	V	D
Template Known Secondary structure		T	T	S					B						S	S	S		S											T	T							S	S				T	T													T	T		S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions