Return to main results Retrieve Phyre Job Id

Job DescriptionP39298
Confidence99.76%DateThu Jan 5 11:59:04 GMT 2012
Rank159Aligned Residues223
% Identity14%Templated1va4a_
SCOP infoalpha/beta-Hydrolases alpha/beta-Hydrolases Haloperoxidase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  EIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSYFAVALAQAGLRVIMPDAPDHGSRFSGDAARRLNQFWQ
Query Conservation   
   

  
      
        
 

  

              
   
  
        
                
Alig confidence 














.......





















































....
Template Conservation   

  

  
 
   .......
 

 





              
   
  

  
  
 
 
          ....
Template Sequence  TFVAKDGTQIYFKDW. . . . . . . GSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYD. . . .
Template Known Secondary structure 
TTS
.......SSSS

TT

GGGGTTT


TTSTTS


SS

S....
Template Predicted Secondary structure 

.......






























....
Template SS confidence 















































































   2.......10...... ...20.........30.........40.........50.........60.........70
 
   83......90.........100.........110.........120.........130.........140.....
Predicted Secondary structure 























.................
Query SS confidence 






























































. . . . . . . . . . . . . . . . .
Query Sequence  ILLQSMQEFTTLRAAIAEENWLLDDRLAVGGASMGAMTALGITARHPTVRCTASMMGSGYFTS. . . . . . . . . . . . . . . . .
Query Conservation                            
   
 
 
                            .................
Alig confidence  ......

















..




































.................
Template Conservation  ......                  ..                                                      
Template Sequence  . . . . . . TFADDIAQLIEHLDLKEV. . TLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFAR
Template Known Secondary structure  ......T

S..TT
STTS


S

B
BTTBTTSB
Template Predicted Secondary structure  ......







..































Template SS confidence 















































































   71........80........ .90.........100.........110.........120.........130.........140..
 
   146...150.........160.........170.........180.........190.......
Predicted Secondary structure  ............................






































Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . .



















































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . LARSLFPPLIPETAAQQNEFNNIVAPLAEWEATNHLEQLSDRPLLLWHGLDD
Query Conservation  ............................                                          
 
   
  
Alig confidence  ............................



















































Template Conservation                                                                        
 
 
 
  
Template Sequence  FKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGD
Template Known Secondary structure  TGGGT



S





S
TT
Template Predicted Secondary structure 



















Template SS confidence 















































































   143......150.........160.........170.........180.........190.........200.........210.........220..
 
   198.200.........210.........220.........230.........240.........
Predicted Secondary structure 


















Query SS confidence 



















































Query Sequence  DVVPADESLRLQQALSETGRDKLLTCSWQPGVRHRITPEALDAAVTFFRQHL
Query Conservation    
           
               
  
            

   
Alig confidence 


















.....



























Template Conservation                     .....    
   

    
 
      
  

Template Sequence  QIVPFETTGKVAAELIKGA. . . . . ELKVYKDAPHGFAVTHAQQLNEDLLAFL
Template Known Secondary structure  SSS
GGGTSTT
.....TT

TTT
Template Predicted Secondary structure 







.....






Template SS confidence 



















































   223......230.........240. ........250.........260.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions