|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | S | R | E | L | A | D | I | P | V | L | H | A | Y | P | V | G | Q | K | D | T | P | L | P | C | V | I | F | Y | H | G | F | T | S | S | S | L | V | Y | S | Y | F | A | V | A | L | A | Q | A | G | L | R | V | I | M | P | D | A | P | D | H | G | S | R | F | S | G | D | A | A | R | R | L | N | Q | F | W | Q | I |
Query Conservation |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
|   |
|
|
|
|   |
|
|
|   |   |
|   |
|
|   |
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |
|
|
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Sequence |   |
L | R | V | N | N | G | Q | E | L | H | V | W | E | T | P | P | K | E | N | V | P | F | K | N | N | T | I | L | I | A | S | G | F | A | R | R | M | D | H | F | A | G | L | A | E | Y | L | S | T | N | G | F | H | V | F | R | Y | D | S | L | H | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | E | F | T |
Template Known Secondary structure |   |
 |  |  | T | T | T |  |  |  |  |  |  |  |  |
|
|
| T | T | S |
|
|
| S |
|  |  |  |  |  |
| T | T |
| G | G | G | G | G | G |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |
|
|
| B |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | Q | S | M | Q | E | F | T | T | L | R | A | A | I | A | E | E | N | W | L | L | D | D | R | L | A | V | G | G | A | S | M | G | A | M | T | A | L | G | I | T | A | R | H | P | T | V | R | C | T | A | S | M | M | G | S | G | Y | F | T | S | L | A | R | S | L | F | P | P | L | I | P | E | T | A | A | Q | Q | N |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|   |   |
|   |   |
|
|
|   |
|
|   | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
| . |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|   |
|
|
|
Template Sequence |   |
M | T | T | G | K | N | S | L | C | T | V | Y | H | W | L | Q | T | K | G | T | . |
. |
. |
Q | N | I | G | L | I | A | A | S | L | S | A | R | V | A | Y | E | V | I | S | D | L | E | . |
L | S | F | L | I | T | A | V | G | V | V | N | L | R | D | T | L | E | K | A | L | G | F | D | Y | L | S | L | P | I | D | E | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . | . |
|
|  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  | T | T | T | S |
| . |
| S |  |  |  |  |  | S |
|
| S |
|  |  |  |  |  |  |  |  |  | S | S |
| G | G | G | S |
| G | G | G |
|
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
164 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | F | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | I | V | A | P | L | A | E | W | E | A | T | N | H | L | E | Q | L | S | D | R | P | L | L | L | W | H | G | L | D | D | D | V | V | P | A | D | E | S | L | R | L | Q | Q | A | L | S | E | T | G | R | D | K | L | L | T | C | S | W | Q | P |
Query Conservation |   |
  |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|   |
|   |
|   |
|   |   |
|
|
|
|   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|   |
|
|   |   |
|   |   |
|   | . | . | . | . |   |
|
|
|   |
|
|   |
Template Sequence |   |
P | N | D | L | D | F | E | G | H | K | L | G | S | E | V | F | V | R | D | C | F | E | H | H | W | D | T | L | D | S | T | L | D | K | V | A | N | T | S | V | P | L | I | A | F | T | A | N | N | D | D | W | V | K | Q | E | E | V | Y | D | M | L | A | H | I | R | T | G | . |
. |
. |
. |
H | C | K | L | Y | S | L | L |
Template Known Secondary structure |   |
| S |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  |  |  | T | T |
| T | T | S |
|  |  |  |  |  |  |  |  | T | T |
| T | T |
| . | . | . | . |
|  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | |
|
|
|
230 | . | . | . | . | . | . | . |
  |
  |   |
228 | . | 230 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
G | V | R | H | R | I |
Query Conservation |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
Template Sequence |   |
G | S | S | H | D | L |
Template Known Secondary structure |   |
T |
|
| S |
| T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
238 | . | 240 | . | . | . |
  |