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Job DescriptionP39298
Confidence98.18%DateThu Jan 5 11:59:04 GMT 2012
Rank263Aligned Residues244
% Identity16%Templated1ac5a_
SCOP infoalpha/beta-Hydrolases alpha/beta-Hydrolases Serine carboxypeptidase-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20. ........30.........40....... ..50.........60... ..
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Query Sequence  SRELADIPVLHAYPVG. . . QKDTPLPCVIFYHGFTSSSLVYSYFA. . . . . . . . . . . . . . . . VALAQAGLRVIMPDAP. DH
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Template Sequence  EQDSSDLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGT
Template Known Secondary structure  SS





S
SGGGSS



TTTB
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TTS

TT
GGGTS

STTS
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   43......50.........60.........70.........80.........90.........100.........110.........120..
 
   66...70.........80.........90.........100. ........110.........120.........130
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Query Sequence  GSRFSGDAARRLNQFWQILLQSMQEFTTLRAAIAEE. . . . NWLLDDRLAVGGASMGAMTALGITARHPT. . . . . . . . . . .
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Template Sequence  GFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDT
Template Known Secondary structure  TT
SS

SSGGGS
TTSS

S
TTGGGST

STTS
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   123......130.........140.........150.........160.........170.........180.........190.........200..
 
   131........140.........150.........160......
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Query Sequence  . . VRCTASMMGSGYFTSLARSLFPPLIPETAAQQNEFN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  YDLKALLIGNGWIDPNTQSLSYLPFAMEKKLIDESNPNFKHLTNAHENCQNLINSASTDEAAHFSYQECENILNLLLSYT
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TTTTS

TTSTT

SGGGGSSS
TT
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   203......210.........220.........230.........240.........250.........260.........270.........280..
 
   167..170......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NIVAPLAEWE
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Template Sequence  RESSQKGTADCLNMYNFNLKDSYPSCGMNWPKDISFVSKFFSTPGVIDSLHLDSDKIDHWKECTNSVGTKLSNPISKPSI
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TTSTTSTT
TTTTTTT

TTSTTTT

TTT




SB



SS


GG
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   283......290.........300.........310.........320.........330.........340.........350.........360..
 
   177..180.........190.........200.........210......... 220.....
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Query Sequence  ATNHLEQLSDRPLLLWHGLDDDVVPADESLRLQQALSETGRDK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LLTCSW
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Template Sequence  HLLPGLLESGIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVS
Template Known Secondary structure  GGTT
TT
STT

TTSS
TT

SSTT



S

TT
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   363......370.........380.........390.........400.........410.........420.........430.........440..
 
   226...230.........240.........
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Query Sequence  QPGVRHRITPEALDAAVTFFRQHL
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Template Sequence  VYNASHMVPFDKSLVSRGIVDIYS
Template Known Secondary structure  TT

SS
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   443......450.........460......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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