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Job DescriptionP39298
Confidence99.93%DateThu Jan 5 11:59:04 GMT 2012
Rank54Aligned Residues206
% Identity19%Templatec3u0vA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:lysophospholipase-like protein 1; PDBTitle: crystal structure analysis of human lyplal1
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50... ......60.........70........
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Query Sequence  IPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSYFAVALAQA. . . . . GLRVIMPDAPDHGSRFSGDAARRLN. . . . . . . .
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Template Sequence  LQRCIVSPAG. . . RHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITN
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   910........ .20.........30.........40.........50.........60.........70.........80.....
 
   7980.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  . . QFWQILLQSMQEFTTLRAAIAEENWLLDDRLAVGGASMGAMTALGITARHPTVRCTASMMGSGYFTSLARSLFPPLIP
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Template Sequence  DCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFL. . . . . . . . . . . . . .
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   86...90.........100.........110.........120.........130.........140.........150.
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  ETAAQQNEFNNIVAPLAEWEATNHLEQLSDRPLLLWHGLDDDVVPADESLRLQQALSETGRDKLLTCSWQPGVRHRITPE
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Template Sequence  . . . . . . . . . . . . . NKASAVYQALQKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVT. . TKFHSFPNVYHELSKT
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   152.......160.........170.........180.........190.........200 .........210......
 
   237..240.........
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Query Sequence  ALDAAVTFFRQHL
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Template Sequence  ELDILKLWILTKL
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   217..220.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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