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Job DescriptionP39298
Confidence99.79%DateThu Jan 5 11:59:04 GMT 2012
Rank145Aligned Residues224
% Identity19%Templatec3nwoA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:proline iminopeptidase; PDBTitle: crystal structure of proline iminopeptidase mycobacterium smegmatis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50... ......60.........70.........80......
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Query Sequence  ELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSYFAVALAQA. GLRVIMPDAPDHGSRFSGDAARRLNQFWQILLQ
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Template Sequence  GDHETWVQVTTPENAQPHA. LPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADFWTPQLFVD
Template Known Secondary structure  TT

SS

TT
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TTT

SGGGGGGGGT



TTSTTS


TTS
GGG

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   15....20.........30... ......40.........50.........60.........70.........80.........90...
 
   87..90.........100.........110.........120.........130.........140.....
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Query Sequence  SMQEFTTLRAAIAEENWLLDDRLAVGGASMGAMTALGITARHPTVRCTASMMGSGYFTS. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EFHAVCTALGI. . . . . . . . . ERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETRAAL
Template Known Secondary structure  T
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STT

TTS

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   94.....100.... .....110.........120.........130.........140.........150.........160....
 
   146...150.........160.........170.........180........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LARSLFPPLIPETAAQQNEFNNIVAPLAEWEATNHLEQLSDRP
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Template Conservation                                                                              
  
Template Sequence  DRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAP
Template Known Secondary structure  T
TTST

SSS

S
T
S
SSS

SGGGG
B
GGGGGG

S
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   189190.........200.........210.........220.........230... ......240........
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Query Sequence  LLLWHGLDDDVVPADESLRLQQALSETGRDKLLTCSWQPGVRHRI. . . . TPEALDAAVTFFRQH
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Template Sequence  VLVIAGEHDEATP. KTWQPFVDHIPDV. . . . . . RSHVFPGTSHCTHLEKPEEFRAVVAQFLHQH
Template Known Secondary structure  TT
SS
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SS......TT

TTS
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   245....250....... ..260.........270 .........280.........290.........300.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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