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Job DescriptionP39298
Confidence100.00%DateThu Jan 5 11:59:04 GMT 2012
Rank15Aligned Residues232
% Identity21%Templatec3k2iA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:acyl-coenzyme a thioesterase 4; PDBTitle: human acyl-coenzyme a thioesterase 4
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  IEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSYFAVALAQAGLRVIMPDAPDHGSRFSGDAARRLNQFW
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Template Sequence  VWRQSVRAGRVRATLFLPPG. . PGPFPGIIDIFGIGGGLLEYR. . ASLLAGHGFATLALAYYNFEDLP. . . . . . . . . . . N
Template Known Secondary structure 
TT
SS..S

B


TT
S


..TTT

SSSTTS
...........S
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   134.....140.........150... ......160.........170.... .....180.........190....... .
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  QILLQSMQEFTTLRAAIAEENWLLDDRLAVGGASMGAMTALGITARHPTVRCTASMMGSGYFTSLARSLFPPLIPETAAQ
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Template Sequence  NMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYD
Template Known Secondary structure  S
S
TTSTTB

SST
SSS

SB

SS
TT



B
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   199200.........210.........220.........230.........240.........250.........260.........270........
 
   162. ......170.........180.........190.........200.... .....210.........220........
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Query Sequence  QN. . . . . . . . . . . . EFNNIVAPLAEWEATNHLEQLSDRPLLLWHGLDDDVVPADE. SLRLQQALSETGRDKLLTCSWQPG
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Template Sequence  LRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEK. PQIICYPG
Template Known Secondary structure  GGG

TTS

TT
B


TTGGGSTTB

GGG

S
TT
SSS
TT


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TT
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   279280.........290.........300.........310.........320.........330.........340......... 350.......
 
   229230... ......240.........
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Query Sequence  VRHRI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TPEALDAAVTFFRQHL
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Template Sequence  TGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHL
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S


STT




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   358.360.........370.........380.........390.........400.........410
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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