Return to main results Retrieve Phyre Job Id

Job DescriptionP39298
Confidence99.93%DateThu Jan 5 11:59:04 GMT 2012
Rank51Aligned Residues238
% Identity16%Templatec3i6yA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:esterase apc40077; PDBTitle: structure of an esterase from the oil-degrading bacterium oleispira2 antarctica
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20. ........30.........40..... ....50.........60.........70.....
Predicted Secondary structure 







.











...
















....
Query SS confidence 

















.























. . .





























. . . .
Query Sequence  IESRELADIPVLHAYPVG. QKDTPLPCVIFYHGFTSSSLVYSY. . . FAVALAQAGLRVIMPDAPDHGSRFSGDAAR. . . .
Query Conservation 
   

  
      
  .      
 

  

          ...    
   
  
        
         ....
Alig confidence 

















.























...





























....
Template Conservation   
          



         



 


 
                      

                     
Template Sequence  VSNTLNCAXRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFXQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQ
Template Known Secondary structure  TTTT
GGGGTT



TT

SSS

T

SS

STT



SSTTSST
Template Predicted Secondary structure 









































Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   76...80.........90.........100.........110.........120.........130.........140........
Predicted Secondary structure  .......






























Query SS confidence  . . . . . . .








































































Query Sequence  . . . . . . . RLNQFWQILLQSMQEFTTLRAAIAEENWLLDDRLAVGGASMGAMTALGITARHPTVRCTASMMGSGYFTSLAR
Query Conservation  .......                                 
   
 
 
                               
Alig confidence  .......








































































Template Conservation                        
  

   
           
 
 
 

  
   
   
  
 
    

        
Template Sequence  GAGFYVNATQAPWNRHYQXYDYVVNELPELIESXFPVSDKRAIAGHSXGGHGALTIALRNPERYQSVSAFSPINNPVNCP
Template Known Secondary structure  T

TT
B

STTGGGT
BTSST
TTT
S
S



GGGS
Template Predicted Secondary structure 





































Template SS confidence 















































































   102.......110.........120.........130.........140.........150.........160.........170.........180.
 
   149150.........160.........170.........180.........190.........200... ......210.........220.......
Predicted Secondary structure 










































.





Query SS confidence 






















































.























Query Sequence  SLFPPLIPETAAQQNEFNNIVAPLAEWEATNHLEQLSDRPLLLWHGLDDDVVPAD. ESLRLQQALSETGRDKLLTCSWQP
Query Conservation                                         
 
   
  
  
   .        
               
Alig confidence 











......




































.














..






Template Conservation              ......                     
  
  
  
               
   
  ..      
Template Sequence  WGQKAFTAYLGK. . . . . . DTDTWREYDASLLXRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNYP. . LELRSHE
Template Known Secondary structure 
S......
GGGTGGG

SS


TT
TTT
TT

..T
Template Predicted Secondary structure 





......






















..
Template SS confidence 















































































   182.......190... ......200.........210.........220.........230.........240...... ...250...
 
   228.230.... .....240.........
Predicted Secondary structure 






..

Query SS confidence 






. .














Query Sequence  GVRHRIT. . PEALDAAVTFFRQHL
Query Conservation 
  
   ..         

   
Alig confidence 






..














Template Conservation 
  
            
 
    
Template Sequence  GYDHSYYFIASFIEDHLRFHSNYL
Template Known Secondary structure  T

SS
Template Predicted Secondary structure 





Template SS confidence 























   254.....260.........270.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions