Job Description P39298 Confidence 99.97% Date Thu Jan 5 11:59:04 GMT 2012 Rank 21 Aligned Residues 230 % Identity 14% Template c3fnbB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:acylaminoacyl peptidase smu_737; PDBTitle: crystal structure of acylaminoacyl peptidase smu_737 from2 streptococcus mutans ua159 Resolution 2.12 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		I	E	I	E	S	R	E	L	A	D	I	P	V	L	H	A	Y	P	V	G	Q	K	D	T	P	L	P	C	V	I	F	Y	H	G	F	T	S	S	S	L	V	Y	.	S	Y	F	A	V	A	L	A	Q	A	G	L	R	V	I	M	P	D	A	P	D	H	G	S	R	F	S	G	D	A	A	R	R	L	N	Q	F
Query Conservation																																												.
Alig confidence							.															.	.	.																				.																																			.	.	.
Template Conservation							.															.	.	.																																																							.	.	.
Template Sequence		I	E	V	P	F	.	E	G	E	L	L	P	G	Y	A	I	I	S	E	D	.	.	.	K	A	Q	D	T	L	I	V	V	G	G	G	D	T	S	R	E	D	L	F	Y	X	L	G	Y	S	G	W	E	H	D	Y	N	V	L	X	V	D	L	P	G	Q	G	K	N	P	N	Q	G	L	H	F	E	V	.	.	.
Template Known Secondary structure							.	T	T											S	S	.	.	.												S	S										T							T	T									T	T	S	T	T	G	G	G	G	T					S	.	.	.
Template Predicted Secondary structure							.															.	.	.																																																							.	.	.
Template SS confidence
		135	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		W	Q	I	L	L	Q	S	M	Q	E	F	T	T	L	R	A	A	I	A	E	E	N	W	L	L	D	D	R	L	A	V	G	G	A	S	M	G	A	M	T	A	L	G	I	T	A	R	H	P	T	V	R	C	T	A	S	M	M	G	S	G	Y	F	T	S	L	A	R	S	L	F	P	P	L	I	P	E	T	A	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																																							.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	D	A	R	A	A	I	S	A	I	L	D	W	Y	Q	A	P	T	E	K	I	A	I	A	G	F	S	G	G	G	Y	F	T	A	Q	A	V	E	K	D	K	R	I	K	A	W	I	A	S	T	P	I	Y	D	V	A	E	V	F	R	I	S	F	S	V	N	K	V	A	E	V	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		S														S	S	S								T	T													T	T								S			S										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
								160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.
Predicted Secondary structure		.	.	.	.	.	.																																																																					.	.	.	.
Query SS confidence		.	.	.	.	.	.																																																																					.	.	.	.
Query Sequence		.	.	.	.	.	.	A	Q	Q	N	E	F	N	N	I	V	A	P	L	A	E	W	E	A	T	N	H	L	E	Q	L	S	D	R	P	L	L	L	W	H	G	L	D	D	D	V	V	P	A	D	E	S	L	R	L	Q	Q	A	L	S	E	T	G	R	D	K	L	L	T	C	S	W	Q	P	.	.	.	.	G	V
Query Conservation		.	.	.	.	.	.																																																																					.	.	.	.
Alig confidence		.	.	.	.	.	.																																																												.	.								.	.	.	.
Template Conservation																																																																			.	.
Template Sequence		L	N	K	Y	A	W	Q	F	G	Q	V	D	F	I	T	S	V	N	E	V	L	E	Q	A	Q	I	V	D	Y	N	K	I	D	V	P	S	L	F	L	V	G	A	G	E	D	S	E	L	X	R	Q	S	Q	V	L	Y	D	N	F	K	Q	R	G	I	D	.	.	V	T	L	R	K	F	S	S	E	S	G	A	D
Template Known Secondary structure										T	S	S																		G	G	G			S								S	S	S																		T	T			.	.								T	T	T	T
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.
		230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		R	H	R	I	T	.	.	.	P	E	A	L	D	A	A	V	T	F	F	R	Q	H	L
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		A	H	C	Q	V	N	N	F	R	L	X	H	Y	Q	V	F	E	W	L	N	H	I	F
Template Known Secondary structure		S	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions