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Job DescriptionP39298
Confidence99.94%DateThu Jan 5 11:59:04 GMT 2012
Rank37Aligned Residues228
% Identity18%Templatec3ed1E_
PDB info PDB header:hydrolase receptorChain: E: PDB Molecule:gibberellin receptor gid1; PDBTitle: crystal structure of rice gid1 complexed with ga3
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSS. . . . . SLVYSYFAVALAQAG. LRVIMPDAPDHGSRFSGDAAR
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Template Sequence  HIIDQSVG. . LEVRIYRADAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPC. . .
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Query Sequence  RLNQFWQILLQSMQEFTTLRAAIAEENWL. . LDDRLAVGGASMGAMTALGITA. . . . RHPTVRCTASMMGSGYFTSLARS
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Template Sequence  . . . . . . . . . . . AYDDGWTALKWVMSQPFMRSAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTES
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   165....170.........180.........190.........200.........210.........220.........230...
 
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Query Sequence  LFPPL. . . . . . . . . . . . IPETAAQQNEFNNIVAPLAEWEATNHLEQLSDRPLLLWHGLDDDVVPADESLRLQQALSETGR
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Template Sequence  ERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCD. . RQLAYADALREDGH
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   237..240.........250.........260.........270.........280.........290.........300 .........310....
 
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Query Sequence  DKLLTCSWQPGVRHRIT. . . . . . . . PEALDAAVTFFRQHL
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Template Sequence  H. . VKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANL
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   315 ....320.........330.........340.........350..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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