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Job DescriptionP39298
Confidence99.92%DateThu Jan 5 11:59:04 GMT 2012
Rank56Aligned Residues240
% Identity18%Templatec3e4dD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:esterase d; PDBTitle: structural and kinetic study of an s-formylglutathione2 hydrolase from agrobacterium tumefaciens
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2...... .10.........20.........30.........40..... ....50.........60.........70.......
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Query Sequence  IEIESRE. LADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSY. . . FAVALAQAGLRVIMPDAPDHGSRFSGDAARRL
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Template Sequence  FSHQSETLKSEXTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVXEKGEYRRXASELGLVVVCPDTSPRGNDVPDELTNWQ
Template Known Secondary structure  TTTT
GGGGTS


TT

SS

T


SS

SSSS


TT
TT
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   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   78.80.........90 .........100.........110.........120.........130.........140....
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Query Sequence  NQFWQILLQSMQE. . . . . . . . . . . . . FTTLRAAIAEENWLLDDRLAVGGASMGAMTALGITARHPTVRCTASMMGSGYFT
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Template Sequence  XGKGAGFYLDATEEPWSEHYQXYSYVTEELPALIGQHFRADXSRQSIFGHSXGGHGAXTIALKNPERFKSCSAFAPIVAP
Template Known Secondary structure  SBTTB
TTSB

STTGGGT
BTSSBT
TTT
S
BS

S
G
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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   145....150.........160.........170.........180.........190.........200... ......210.........220...
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Query Sequence  SLARSLFPPLIPETAAQQNEFNNIVAPLAEWEATNHLEQLSDRPLLLWHGLDDDVVPAD. ESLRLQQALSETGRDKLLTC
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Template Sequence  SSADWSEPALEKYLGADRAAWRRYDACSLV. . . . . . EDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDIG. . LTL
Template Known Secondary structure  GG
TTT
S
TTTTGGG
......TT


STT
TTT
TTTTS

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   177..180.........190.........200...... ...210.........220.........230.........240..... ...
 
   224.....230. ........240.........
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Query Sequence  SWQPGVRH. . RITPEALDAAVTFFRQHL
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Template Sequence  RXHDRYDHSYYFISTFXDDHLKWHAERL
Template Known Secondary structure  TT

SS
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   249250.........260.........270......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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