Job Description P39298 Confidence 99.90% Date Thu Jan 5 11:59:04 GMT 2012 Rank 80 Aligned Residues 212 % Identity 18% Template c3dyvA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:esterase d; PDBTitle: snapshots of esterase d from lactobacillus rhamnosus:2 insights into a rotation driven catalytic mechanism Resolution 1.81 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	P	L	P	C	V	I	F	Y	H	G	F	T	S	S	S	L	V	Y	S	Y	F	A	V	A	L	A	Q	A	G	L	R	V	I	M	P	D	A	P	D	H	G	S	R	F	S	G	D	A	A	R	R	L	N	Q	F	W	Q	I	L	L	Q	S	M	Q	E	F	T	T	L	R	A	A	I	A	E	E	N	W
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.
Template Sequence		E	G	T	D	T	G	V	V	L	L	H	A	Y	T	G	S	P	N	D	M	N	F	M	A	R	A	L	Q	R	S	G	Y	G	V	Y	V	P	L	F	S	G	H	G	T	V	E	P	L	D	I	L	T	K	G	N	.	.	.	.	.	.	.	.	.	P	D	I	W	W	A	E	S	S	A	A	V	A	H	M	T
Template Known Secondary structure				S	S									T	T			G	G	G	G										T	T									T	T		S	S	S		T									.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.										.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.													.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	D	D	R	L	A	V	G	G	A	S	M	G	A	M	T	A	L	G	I	T	A	R	H	P	T	V	R	C	T	A	S	M	M	G	S	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	F	T	S	L	A	R	S	L	F	P	P	L	I	P	E	T	A	A	Q	Q	N	E	F	N	N	I	V	A	P
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	Y	A	K	V	F	V	F	G	L	S	L	G	G	I	F	A	M	K	A	L	E	T	L	P	G	I	T	A	G	G	V	F	S	S	P	I	L	P	G	K	H	H	L	V	P	G	F	L	K	Y	A	E	Y	M	N	R	L	A	G	K	S	D	E	S	T	Q	I	L	A	Y	L	P	G	Q	L	A	A	I
Template Known Secondary structure		T	T		S								T														S	S								S				S																						T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.						.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		L	A	E	W	E	A	T	N	H	L	E	Q	L	S	D	R	P	L	L	L	W	H	G	L	D	D	D	V	V	P	A	D	E	S	L	R	L	Q	Q	A	L	S	E	T	G	R	D	K	L	L	T	C	S	W	Q	P	G	V	R	H	R	I	T	.	.	.	.	.	P	E	A	L	D	A	A	V	T	F	F	R
Query Conservation																																																																	.	.	.	.	.
Alig confidence																																																.	.	.															.	.	.	.	.
Template Conservation																																																.	.	.
Template Sequence		D	Q	F	A	T	T	V	A	A	D	L	N	L	V	K	Q	P	T	F	I	G	Q	A	G	Q	D	E	L	V	D	G	R	L	A	Y	Q	L	R	D	A	L	I	N	A	A	R	.	.	.	V	D	F	H	W	Y	D	D	A	K	H	V	I	T	V	N	S	A	H	H	A	L	E	E	D	V	I	A	F	M	Q
Template Known Secondary structure											T	G	G	G			S								T	T		S	S	S		T	T										T	T		S		.	.	.							T	T			S		T	T	T	S	T	T
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		247
Predicted Secondary structure
Query SS confidence
Query Sequence		Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		240

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions