Job Description P39298 Confidence 99.72% Date Thu Jan 5 11:59:04 GMT 2012 Rank 178 Aligned Residues 216 % Identity 17% Template c3bf7B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:esterase ybff; PDBTitle: 1.1 resolution structure of ybff, a new esterase from2 escherichia coli: a unique substrate-binding crevice3 generated by domain arrangement Resolution 1.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	P	V	L	H	A	Y	P	V	G	Q	K	D	T	P	L	P	C	V	I	F	Y	H	G	F	T	S	S	S	L	V	Y	S	Y	F	A	V	A	L	A	Q	A	G	L	R	V	I	M	P	D	A	P	D	H	G	S	R	F	S	G	D	A	A	R	R	L	N	Q	F	W	Q	I	L	L	Q	S	M	Q	E
Query Conservation
Alig confidence																		.	.																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	N	I	R	A	Q	T	A	Q	N	Q	H	N	N	S	.	.	P	I	V	L	V	H	G	L	F	G	S	L	D	N	L	G	V	L	A	R	D	L	V	N	.	D	H	N	I	I	Q	V	D	V	R	N	H	G	L	S	P	R	E	P	V	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Template Known Secondary structure											S	S						.	.								T	T			T	T	T	T								T	T	.	T	S								T	T	S	T	T	S				S				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.															.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	T	T	L	R	A	A	I	A	E	E	N	W	L	L	D	D	R	L	A	V	G	G	A	S	M	G	A	M	T	A	L	G	I	T	A	R	H	P	T	V	R	C	T	A	S	M	M	G	S	G	Y	F	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	M	A	Q	D	L	V	D	T	L	D	A	L	Q	I	D	K	A	T	F	I	G	H	S	M	G	G	K	A	V	M	A	L	T	A	L	A	P	D	R	I	D	K	L	V	A	I	D	I	A	P	V	D	Y	H	V	R	R	H	D	E	I	F	A	A	I	N	A	V	S	E	S	D	A	Q	T	R	Q	Q
Template Known Secondary structure																T		S								T														G	G	G								S			S	S				S																S				S
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
												146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	L	A	R	S	L	F	P	P	L	I	P	E	T	A	A	Q	Q	N	E	F	N	N	I	V	A	P	L	A	E	W	E	A	T	N	H	L	E	Q	L	S	D	R	P	L	L	L	W	H	G	L	D	D	D	V	V	P	A	D	E	S	L	R	L	Q	Q	A	L	S	E	T
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	A	I	M	R	Q	H	L	N	E	E	G	V	I	Q	F	L	L	K	S	F	V	D	G	E	W	R	F	N	V	P	V	L	W	D	Q	Y	P	H	I	V	G	W	E	K	I	P	A	W	D	H	P	A	L	F	I	P	G	G	N	S	P	Y	V	S	E	Q	Y	R	D	D	L	L	A	Q	F	P	Q	A
Template Known Secondary structure							T	T	T												T	T			T	T			S	S								T															S							B	T	T		S	T	T		G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	D	K	L	L	T	C	S	W	Q	P	G	V	R	H	R	I	T	P	E	A	L	D	A	A	V	T	F	F	R	Q	H	L
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	R	A	H	V	I	A	G	A	G	H	W	V	H	A	E	K	P	D	A	V	L	R	A	I	R	R	Y	L
Template Known Secondary structure		.	.	.	.	.	.					B	T	T			S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions