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Job DescriptionP39298
Confidence99.68%DateThu Jan 5 11:59:04 GMT 2012
Rank189Aligned Residues223
% Identity15%Templatec3a2nF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:haloalkane dehalogenase; PDBTitle: crystal structure of dbja (wild type type ii p21)
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  IEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSYFAVALAQAGLRVIMPDAPDHGSRFSGDAARRLNQFW
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Template Sequence  IRRAPVLGSSMAYRETGA. . . . . QDAPVVLFLHGNPTSSHIWRNILPLVSP. VAHCIAPDLIGFGQSGKPDIAYRFFDHV
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TTS
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TT

GGGGTTTTT.TS

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   910.........20...... ...30.........40.........50.... .....60.........70.........80..
 
   82.......90.........100.........110.........120.........130.........140.....
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Query Sequence  QILLQSMQEFTTLRAAIAEENWLLDDRLAVGGASMGAMTALGITARHPTVRCTASMMGSGYFTS. . . . . . . . . . . . . . . .
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Template Sequence  RYLDAFIEQRGV. . . . . . . . . . . . . TSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDH
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TTT


BSSGGGTT



GGG
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   83......90.... .....100.........110.........120.........130.........140.........
 
   146...150.........160.........170....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LARSLFPPLIPETAAQQNEFNNIVAPLAE
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Template Conservation                                                                                  
Template Sequence  AEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEA
Template Known Secondary structure  TSTTTTT
TT
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TT

STGGGS
BTTBS
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   150.........160.........170.........180.........190.........200.........210.........220.........
 
   175....180.........190.........200.........210.........220.........230.........240.........
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Query Sequence  WEATNHLEQLSDRPLLLWHGLDDDVVPADESLRLQQALSETGRDKLLTCSWQPGVRHRITPEALDAAVTFFRQHL
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Template Sequence  LQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASLTRC. . . . . . ALIRLGAGLHYLQEDHADAIGRSVAGWI
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S

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   230.........240.........250.........260.........270 .........280.........290........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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