Job Description P39298 Confidence 99.78% Date Thu Jan 5 11:59:04 GMT 2012 Rank 150 Aligned Residues 225 % Identity 17% Template c2yysA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:proline iminopeptidase-related protein; PDBTitle: crystal structure of the proline iminopeptidase-related protein2 ttha1809 from thermus thermophilus hb8 Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	I	E	S	R	E	L	A	D	I	P	V	L	H	A	Y	P	V	G	Q	K	D	T	P	L	P	C	V	I	F	Y	H	G	F	T	S	S	S	L	V	Y	S	Y	F	A	V	A	L	A	Q	A	G	L	R	V	I	M	P	D	A	P	D	H	G	S	R	F	S	G	D	A	A	R	R	L	N	Q	F	W
Query Conservation
Alig confidence																							.	.	.	.	.																																																				.	.	.
Template Conservation																							.	.	.	.	.																																																				.	.	.
Template Sequence		I	G	Y	V	P	V	G	E	A	E	L	Y	V	E	D	V	G	P	V	E	G	.	.	.	.	.	P	A	L	F	V	L	H	G	G	P	G	G	N	A	Y	V	L	R	E	G	L	Q	D	Y	L	E	G	F	R	V	V	Y	F	D	Q	R	G	S	G	R	S	L	E	L	P	Q	D	P	R	L	F	.	.	.
Template Known Secondary structure								S	S									S		T	T	S	.	.	.	.	.									T	T	T			S								G	G	G		T	T	S								T	T	S	T	T	S					S		G	G	G		.	.	.
Template Predicted Secondary structure																							.	.	.	.	.																																																				.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	L	L	Q	S	M	Q	E	F	T	T	L	R	A	A	I	A	E	E	N	W	L	L	D	D	R	L	A	V	G	G	A	S	M	G	A	M	T	A	L	G	I	T	A	R	H	P	T	V	R	C	T	A	S	M	M	G	S	G	Y	F	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																					.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																					.	.
Template Sequence		.	.	.	.	.	T	V	D	A	L	V	E	D	T	L	L	L	A	E	A	L	G	V	E	R	.	.	F	G	L	L	A	H	G	F	G	A	V	V	A	L	E	V	L	R	R	F	P	Q	A	E	G	A	I	L	L	A	P	W	V	N	F	P	W	L	A	A	R	L	A	E	A	A	G	L	A	P	L	P	D
Template Known Secondary structure		.	.	.	.	.																T	T			S	.	.							T	T													T	T								S				B												T	T					S
Template Predicted Secondary structure		.	.	.	.	.																					.	.
Template SS confidence
							77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
																														146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	R	S	L	F	P	P	L	I	P	E	T	A	A	Q	Q	N	E	F	N	N	I	V	A	P	L	A	E	W	E	A	T	N	H	L	E	Q	L	S	D	R	P	L	L	L	W	H	G	L	D	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	E	N	L	K	E	A	L	K	R	E	E	P	K	A	L	F	D	R	L	M	F	P	T	P	R	G	R	M	A	Y	E	W	L	A	E	G	A	G	I	L	G	S	D	A	P	G	L	A	F	L	R	N	G	L	W	R	L	D	Y	T	P	Y	L	T	P	E	R	R	P	L	Y	V	L	V	G	E	R	D
Template Known Secondary structure													S												S	S														T	T					S									T	T	G	G	G		B		G	G	G					S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	P	A	D	E	S	L	R	L	Q	Q	A	L	S	E	T	G	R	D	K	L	L	T	C	S	W	Q	P	G	V	R	H	R	I	T	P	E	A	L	D	A	A	V	T	F	F	R	Q	H	L
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		G	T	S	Y	P	Y	A	E	E	V	A	S	R	L	.	.	.	.	.	.	.	.	R	A	P	I	R	V	L	P	E	A	G	H	Y	L	W	I	D	A	P	E	A	F	E	E	A	F	K	E	A	L
Template Known Secondary structure		T	T	T	T	T	T									.	.	.	.	.	.	.	.	T							T	T			S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.									.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions