Job Description P39298 Confidence 100.00% Date Thu Jan 5 11:59:04 GMT 2012 Rank 8 Aligned Residues 246 % Identity 14% Template c2xe4A_ PDB info PDB header:hydrolase/inhibitor Chain: A: PDB Molecule:oligopeptidase b; PDBTitle: structure of oligopeptidase b from leishmania major Resolution 1.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.																						.	.
Query SS confidence																						.																						.	.
Query Sequence		I	E	I	E	S	R	E	L	A	D	I	P	V	L	H	A	Y	P	V	G	.	Q	K	D	T	P	L	P	C	V	I	F	Y	H	G	F	T	S	S	S	L	V	.	.	Y	S	Y	F	A	V	A	L	A	Q	A	G	L	R	V	I	M	P	D	A	P	D	H	G	S	R	F	S	G	D	A	A	R	R	L	N
Query Conservation																						.																						.	.
Alig confidence																						.																						.	.																									.	.
Template Conservation																																																																						.	.
Template Sequence		R	F	A	T	A	P	D	Q	T	K	I	P	L	S	V	V	Y	H	K	D	L	D	M	S	Q	P	Q	P	C	M	L	Y	G	Y	G	S	Y	G	L	S	M	D	P	Q	F	S	I	Q	H	L	P	Y	C	D	R	G	M	I	F	A	I	A	H	I	R	G	G	S	.	.	E	L	G	R	A	W	Y	E	I	G
Template Known Secondary structure							T	T												T	T	S		T	T	S												T	T									G	G	G					T	T	T									T	T	S		.	.	T	T		T					T	T
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530			.	.	.	.	.	.	.	.	.	540
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		Q	F	W	Q	I	L	L	Q	S	M	Q	E	F	T	T	L	R	A	A	I	A	E	E	N	W	L	L	D	D	R	L	A	V	G	G	A	S	M	G	A	M	T	A	L	G	I	T	A	R	H	P	T	.	V	R	C	T	A	S	M	M	G	S	G	Y	F	T	S	L	A	R	S	L	F	P	P	L	I	P	E
Query Conservation																																																						.
Alig confidence																																																						.
Template Conservation
Template Sequence		A	K	Y	L	T	K	R	N	T	F	S	D	F	I	A	A	A	E	F	L	V	N	A	K	L	T	T	P	S	Q	L	A	C	E	G	R	S	A	G	G	L	L	M	G	A	V	L	N	M	R	P	D	L	F	K	V	A	L	A	G	V	P	F	V	D	V	M	T	T	M	C	D	P	S	I	P	L	T	T	G
Template Known Secondary structure		S	S	G	G	G	T																	T	T	S			G	G	G							T														G	G	G		S						S										T		T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
		158	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure											.	.																																																						.
Query SS confidence											.	.																																																						.
Query Sequence		T	A	A	Q	Q	N	E	F	N	.	.	N	I	V	A	P	L	A	E	W	E	A	T	N	H	L	E	Q	L	S	D	R	P	L	L	L	W	H	G	L	D	D	D	V	V	P	A	D	E	S	L	R	L	Q	Q	A	L	S	E	T	G	R	D	K	.	L	L	T	C	S	W	Q	P	G	V	R	H	R	I	T
Query Conservation											.	.																																																						.
Alig confidence											.	.																																																						.
Template Conservation
Template Sequence		E	W	E	E	W	G	N	P	N	E	Y	K	Y	Y	D	Y	M	L	S	Y	S	P	M	D	N	V	R	A	Q	E	Y	P	N	I	M	V	Q	C	G	L	H	D	P	R	V	A	Y	W	E	P	A	K	W	V	S	K	L	R	E	C	K	T	D	N	N	E	I	L	L	N	I	D	M	E	S	G	H	F	S	A
Template Known Secondary structure			T	T	T	T			T	T	S												T	G	G	G			S	S											T	T		S	S	S		T																S										T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
								235	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	P	E	A	L	D	A	A	V	T	F	F	R	Q	H	L
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	R	Y	K	F	W	K	E	S	A	I	Q	Q	A	F	V	C	K	H	L
Template Known Secondary structure		S	S																			T
Template Predicted Secondary structure
Template SS confidence
		701	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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