Job Description P39298 Confidence 96.45% Date Thu Jan 5 11:59:04 GMT 2012 Rank 272 Aligned Residues 194 % Identity 13% Template c2vsqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:surfactin synthetase subunit 3; PDBTitle: structure of surfactin a synthetase c (srfa-c), a2 nonribosomal peptide synthetase termination module Resolution 2.60 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	T	P	L	P	C	V	I	F	Y	H	G	F	T	S	S	S	L	V	Y	S	Y	F	A	V	A	L	A	Q	A	G	L	R	V	I	M	P	D	A	P	D	H	G	S	R	F	S	G	D	A	A	R	R	L	N	Q	F	W	Q	I	L	L	Q	S	M	Q	E	F	T	T	L	R	A	A	I	A	E	E	N
Query Conservation
Alig confidence																														.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Q	D	Q	E	Q	I	I	F	A	F	P	P	V	L	G	Y	G	L	M	Y	Q	N	L	S	S	R	L	.	.	P	S	Y	K	L	C	A	F	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	E	E	D	R	L	D	R	Y	A	D	L	I	Q	K	L	Q	P	E	G
Template Known Secondary structure			T	T	S										T	T		B	G	G	G	G					T	T		.	.		S							B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T	T															S	S
Template Predicted Secondary structure																														.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1054	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.			.	.	.	.	.	.	.	.	1090	.																				.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		W	L	L	D	D	R	L	A	V	G	G	A	S	M	G	A	M	T	A	L	G	I	T	A	R	H	P	T	V	R	C	T	A	S	.	M	M	G	S	G	Y	F	T	S	L	A	R	S	L	F	P	P	L	I	P	E	T	A	A	Q	Q	N	E	F	N	N	I	V	A	P	L	A	E	W	E	A	T	N	H	L
Query Conservation																																				.
Alig confidence		.	.	.	.	.																														.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	P	L	T	L	F	G	Y	S	A	G	C	S	L	A	F	E	A	A	K	K	L	E	E	Q	G	R	I	V	Q	R	I	I	M	V	D	S	Y	K	K	Q	G	V	S	T	V	E	S	D	V	E	A	L	M	N	V	N	R	E	A	V	K	H	G	L	K	Q	K	T	H	A	F	Y	S	Y	Y
Template Known Secondary structure		.	.	.	.	.								T	T															S	S										S						S													T	T				T	T	T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							1113	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		E	Q	L	S	D	R	P	L	L	L	W	H	G	L	D	D	D	V	V	P	A	D	E	S	L	R	L	Q	Q	A	L	S	E	T	G	R	D	K	L	L	T	C	S	W	Q	P	G	V	R	H	.	.	R	I	T	P	E	A	L	D	A	A	V	T	F	F	R	Q	H	L
Query Conservation																																																				.	.
Alig confidence																											.	.	.	.	.	.																	.			.	.
Template Conservation																											.	.	.	.	.	.																	.
Template Sequence		V	N	Q	V	K	A	D	I	D	L	L	T	S	G	A	D	F	D	I	P	E	W	L	A	S	.	.	.	.	.	.	W	E	E	A	T	T	G	V	Y	R	M	K	R	G	F	G	.	T	H	A	E	M	L	Q	G	E	T	L	D	R	N	A	E	I	L	L	E	F	L
Template Known Secondary structure					B	S	S								S	S						S	S				.	.	.	.	.	.	S	S	T	T	B	S	S								S	S	.		T	T	G	G	G	S
Template Predicted Secondary structure																											.	.	.	.	.	.																	.
Template SS confidence
		1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.							.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240		.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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