Job Description P39298 Confidence 99.75% Date Thu Jan 5 11:59:04 GMT 2012 Rank 165 Aligned Residues 225 % Identity 19% Template c2vf2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate PDBTitle: x-ray crystal structure of hsad from mycobacterium2 tuberculosis Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		I	E	I	E	S	R	E	L	A	D	I	P	V	L	H	A	Y	P	V	G	Q	K	D	T	P	L	P	C	V	I	F	Y	H	G	F	T	S	S	S	L	V	Y	S	Y	F	A	V	A	L	A	.	.	Q	A	G	L	R	V	I	M	P	D	A	P	D	H	G	S	R	F	S	G	D	A	A	R	R	L	N	Q
Query Conservation																																																				.	.
Alig confidence																				.	.	.	.	.																												.	.																												.
Template Conservation																				.	.	.	.	.																																																									.
Template Sequence		A	E	V	D	V	D	G	P	L	K	L	H	Y	H	E	A	G	V	.	.	.	.	.	G	N	D	Q	T	V	V	L	L	H	G	G	G	P	G	A	A	S	W	T	N	F	S	R	N	I	A	V	L	A	R	H	F	H	V	L	A	V	D	Q	P	G	Y	G	H	S	D	K	R	A	E	H	G	Q	F	N	.
Template Known Secondary structure						S	S	S											T	.	.	.	.	.	T		S										S	T	T							S	T	T	T						T	T	S								T	T	S	T	T	S				S			S	S			.
Template Predicted Secondary structure																				.	.	.	.	.																																																									.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	W	Q	I	L	L	Q	S	M	Q	E	F	T	T	L	R	A	A	I	A	E	E	N	W	L	L	D	D	R	L	A	V	G	G	A	S	M	G	A	M	T	A	L	G	I	T	A	R	H	P	T	V	R	C	T	A	S	M	M	G	S	G	Y	F	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																			.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		.	.	.	.	.	.	.	.	.	R	Y	A	A	M	A	L	K	G	L	F	D	Q	L	G	L	G	R	.	.	V	P	L	V	G	N	S	L	G	G	G	T	A	V	R	F	A	L	D	Y	P	A	R	A	G	R	L	V	L	M	G	P	G	G	L	S	I	N	L	F	A	P	D	P	T	E	G	V	K	R	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.															T			S	.	.							T													S	G	G	G								S		S	S	S				S	S	S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
											90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
																																	146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	R	S	L	F	P	P	L	I	P	E	T	A	A	Q	Q	N	E	F	N	N	I	V	A	P	L	A	E	W	E	A	T	N	H	L	E	Q	L	S	D	R	P	L	L	L	W	H	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	F	S	V	A	P	T	R	E	N	L	E	A	F	L	R	V	M	V	Y	D	K	N	L	I	T	P	E	L	V	D	Q	R	F	A	L	A	S	T	P	E	S	L	T	A	T	R	A	M	G	K	S	F	A	G	A	D	F	E	A	G	M	M	W	R	E	V	Y	R	L	R	Q	P	V	L	L	I	W	G
Template Known Secondary structure							S												T	S		S	S	G	G	G														T	S														T	T	S	T	T	G	G	G	G		G	G	G	T	G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	D	D	V	V	P	A	D	E	S	L	R	L	Q	Q	A	L	S	E	T	G	R	D	K	L	L	T	C	S	W	Q	P	G	V	R	H	R	I	T	P	E	A	L	D	A	A	V	T	F	F	R	Q	H	L
Query Conservation
Alig confidence																							.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		R	E	D	R	V	N	P	L	D	G	A	L	V	A	L	K	T	I	P	R	A	.	.	.	.	.	.	Q	L	H	V	F	G	Q	C	G	H	W	V	Q	V	E	K	F	D	E	F	N	K	L	T	I	E	F	L
Template Known Secondary structure		T	T		S	S	S		G	G	G	G								T	T		.	.	.	.	.	.						T	T			S						T												T
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.							260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions